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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183630453
OOGS01017231
176796
Gammaproteobacteria
GGG
Pro
>WENV183630214
OOGS01000056
185999
Gammaproteobacteria
CCG
Arg
>WENV183630212
OOGS01000050
311084
Gammaproteobacteria
GCC
Gly
>WENV183630213
OOGS01000050
480629
Gammaproteobacteria
GCA
Cys
>WENV183630316
OOGS01003233
243308
Gammaproteobacteria
TGG
Pro
>WENV183630280
OOGS01001026
181365
Gammaproteobacteria
CAT
Met
>WENV183630190
OOGS01000007
176301
Gammaproteobacteria
GAT
Ile
>WENV183630525
OOGS01032034
176301
Gammaproteobacteria
GAT
Ile
>WENV183630184
OOGS01000001
340790
Gammaproteobacteria
TGT
Thr
>WENV183630206
OOGS01000039
281791
Gammaproteobacteria
GTG
His
>WENV183630290
OOGS01001401
281791
Gammaproteobacteria
GTG
His
>WENV183630377
OOGS01007534
181277
Gammaproteobacteria
ACG
Arg
>WENV183630198
OOGS01000025
286980
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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