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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183636934
OOQC01000713
29387
Gammaproteobacteria
GGA
Ser
>WENV183637025
OOQC01205549
341033
Gammaproteobacteria
GTT
Asn
>WENV183636980
OOQC01034585
281229
Gammaproteobacteria
GTT
Asn
>WENV183636960
OOQC01012076
366546
Gammaproteobacteria
GTG
His
>WENV183636927
OOQC01000486
117757
Gammaproteobacteria
>WENV183636897
OOQC01000062
281352
Gammaproteobacteria
TGT
Thr
>WENV183636983
OOQC01034646
281352
Gammaproteobacteria
TGT
Thr
>WENV183637042
OOQC01315103
117930
Gammaproteobacteria
CAA
Leu
>WENV183636926
OOQC01000483
175989
Gammaproteobacteria
GGG
Pro
>WENV183637009
OOQC01133723
179613
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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