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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183700310
OZSS01171145
284706
Gammaproteobacteria
GTT
Asn
>WENV183699418
OZSS01025224
480941
Gammaproteobacteria
TCC
Gly
>WENV183699311
OZSS01020493
314350
Gammaproteobacteria
CCA
Trp
>WENV183699126
OZSS01012868
176796
Gammaproteobacteria
GGG
Pro
>WENV183698943
OZSS01007589
292194
Gammaproteobacteria
GGT
Thr
>WENV183699022
OZSS01009808
178025
Gammaproteobacteria
GAC
Val
>WENV183699144
OZSS01013573
178025
Gammaproteobacteria
GAC
Val
>WENV183698322
OZSS01000454
229289
Gammaproteobacteria
TGG
Pro
>WENV183699196
OZSS01015597
229289
Gammaproteobacteria
TGG
Pro
>WENV183699048
OZSS01010649
282550
Gammaproteobacteria
TAC
Val
>WENV183699291
OZSS01019595
317782
Gammaproteobacteria
TAC
Val
>WENV183699236
OZSS01017107
292006
Gammaproteobacteria
TGC
Ala
>WENV183700052
OZSS01090276
292006
Gammaproteobacteria
TGC
Ala
>WENV183700100
OZSS01099502
292006
Gammaproteobacteria
TGC
Ala
>WENV183698334
OZSS01000510
281668
Gammaproteobacteria
TTT
Lys
>WENV183699413
OZSS01025121
481325
Gammaproteobacteria
TCC
Gly
>WENV183698864
OZSS01005972
176610
Gammaproteobacteria
ACG
Arg
>WENV183699044
OZSS01010482
176610
Gammaproteobacteria
ACG
Arg
>WENV183699092
OZSS01011798
176610
Gammaproteobacteria
ACG
Arg
>WENV183700099
OZSS01099502
176301
Gammaproteobacteria
GAT
Ile
>WENV183699955
OZSS01072084
282018
Gammaproteobacteria
TGT
Thr
>WENV183699037
OZSS01010391
281939
Gammaproteobacteria
TTT
Lys
>WENV183699136
OZSS01013352
281939
Gammaproteobacteria
TTT
Lys
>WENV183699287
OZSS01019493
179710
Gammaproteobacteria
GAC
Val
>WENV183698895
OZSS01006575
186591
Gammaproteobacteria
ACG
Arg
>WENV183700044
OZSS01089121
186591
Gammaproteobacteria
ACG
Arg
>WENV183699411
OZSS01025121
282902
Gammaproteobacteria
TGT
Thr
>WENV183699442
OZSS01026251
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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