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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181078538
OEAS01000121
282761
Spirochaetota
TTG
Gln
>WENV181078612
OEAS01000187
289040
Spirochaetota
GTT
Asn
>WENV181078748
OEAS01000443
403723
Spirochaetota
TTC
Glu
>WENV181078749
OEAS01000445
178845
Spirochaetota
CAT
Met
>WENV181078782
OEAS01000510
282765
Spirochaetota
GAA
Phe
>WENV181078792
OEAS01000541
178845
Spirochaetota
CAT
Met
>WENV181079006
OEAS01001352
403723
Spirochaetota
TTC
Glu
>WENV181079078
OEAS01001761
403723
Spirochaetota
TTC
Glu
>WENV181079082
OEAS01001794
289040
Spirochaetota
GTT
Asn
>WENV181079191
OEAS01002789
289040
Spirochaetota
GTT
Asn
>WENV181079400
OEAS01005847
282765
Spirochaetota
GAA
Phe
>WENV181079434
OEAS01006479
289040
Spirochaetota
GTT
Asn
>WENV181079449
OEAS01006794
282765
Spirochaetota
GAA
Phe
>WENV181079467
OEAS01007113
282765
Spirochaetota
GAA
Phe
>WENV181079525
OEAS01008194
289040
Spirochaetota
GTT
Asn
>WENV181079578
OEAS01009452
183891
Spirochaetota
GGG
Pro
>WENV181079587
OEAS01009820
289040
Spirochaetota
GTT
Asn
>WENV181079808
OEAS01015561
282765
Spirochaetota
GAA
Phe
>WENV181079821
OEAS01016109
178845
Spirochaetota
CAT
Met
>WENV181079884
OEAS01018454
403723
Spirochaetota
TTC
Glu
>WENV181080009
OEAS01022769
403723
Spirochaetota
TTC
Glu
>WENV181080096
OEAS01026398
178845
Spirochaetota
CAT
Met
>WENV181080191
OEAS01032080
282765
Spirochaetota
GAA
Phe
>WENV181080378
OEAS01043970
178845
Spirochaetota
CAT
Met
>WENV181080399
OEAS01045384
289040
Spirochaetota
GTT
Asn
>WENV181080594
OEAS01060077
183891
Spirochaetota
GGG
Pro
>WENV181080636
OEAS01064307
282765
Spirochaetota
GAA
Phe
>WENV181080657
OEAS01066174
282765
Spirochaetota
GAA
Phe
>WENV181080668
OEAS01066646
178845
Spirochaetota
CAT
Met
>WENV181080949
OEAS01105597
178845
Spirochaetota
CAT
Met
>WENV181081083
OEAS01124098
289040
Spirochaetota
GTT
Asn
>WENV181081285
OEAS01170306
183897
Spirochaetota
TGC
Ala
>WENV181081532
OEAS01249925
282765
Spirochaetota
GAA
Phe
>WENV181082067
OEAS01560532
403723
Spirochaetota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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