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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181953801
OGZI01032321
407608
Thermodesulfobacteriota
TTG
Gln
>WENV181953751
OGZI01024633
406378
Thermodesulfobacteriota
CCC
Gly
>WENV181953308
OGZI01004917
214925
Thermodesulfobacteriota
GTC
Asp
>WENV181953714
OGZI01020344
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV181953163
OGZI01003205
175867
Thermodesulfobacteriota
GGG
Pro
>WENV181953430
OGZI01007797
295177
Thermodesulfobacteriota
CTT
Lys
>WENV181953200
OGZI01003618
294203
Thermodesulfobacteriota
GGC
Ala
>WENV181953651
OGZI01016000
294203
Thermodesulfobacteriota
GGC
Ala
>WENV181953120
OGZI01002704
188874
Thermodesulfobacteriota
TTC
Glu
>WENV181953376
OGZI01006309
188874
Thermodesulfobacteriota
TTC
Glu
>WENV181953112
OGZI01002671
183758
Thermodesulfobacteriota
CCA
Trp
>WENV181953669
OGZI01016988
183758
Thermodesulfobacteriota
CCA
Trp
>WENV181953184
OGZI01003477
302242
Thermodesulfobacteriota
GAA
Phe
>WENV181953237
OGZI01004104
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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