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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183492976
OMGI01002867
407608
Thermodesulfobacteriota
TTG
Gln
>WENV183492987
OMGI01003097
406378
Thermodesulfobacteriota
CCC
Gly
>WENV183492819
OMGI01000917
214925
Thermodesulfobacteriota
GTC
Asp
>WENV183492818
OMGI01000917
293149
Thermodesulfobacteriota
CAC
Val
>WENV183493084
OMGI01006154
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV183493172
OMGI01010100
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183493008
OMGI01003705
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183493236
OMGI01016295
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183493191
OMGI01011905
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183492751
OMGI01000559
302242
Thermodesulfobacteriota
GAA
Phe
>WENV183492901
OMGI01001758
295466
Thermodesulfobacteriota
CGC
Ala
>WENV183493060
OMGI01005118
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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