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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183600926
OODJ01000065
407608
Thermodesulfobacteriota
TTG
Gln
>WENV183601056
OODJ01000185
214925
Thermodesulfobacteriota
GTC
Asp
>WENV183601091
OODJ01000234
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV183601323
OODJ01000833
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183601268
OODJ01000602
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183601180
OODJ01000397
294203
Thermodesulfobacteriota
GGC
Ala
>WENV183601432
OODJ01001279
294203
Thermodesulfobacteriota
GGC
Ala
>WENV183600919
OODJ01000058
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183601286
OODJ01000659
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183601093
OODJ01000234
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183602116
OODJ01016679
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183601071
OODJ01000204
302242
Thermodesulfobacteriota
GAA
Phe
>WENV183601242
OODJ01000523
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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