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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183604019
OODL01000849
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183604020
OODL01000849
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183603782
OODL01000223
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183603783
OODL01000223
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183604150
OODL01001369
156932
Thermodesulfobacteriota
ACG
Arg
>WENV183604016
OODL01000843
345926
Thermodesulfobacteriota
CTG
Gln
>WENV183604079
OODL01001072
345926
Thermodesulfobacteriota
CTG
Gln
>WENV183603834
OODL01000304
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183604762
OODL01049602
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183603954
OODL01000612
248694
Thermodesulfobacteriota
CAT
Met
>WENV183604271
OODL01002199
128663
Thermodesulfobacteriota
CGG
Pro
>WENV183604246
OODL01001943
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183604080
OODL01001072
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183604017
OODL01000843
156452
Thermodesulfobacteriota
TTC
Glu
>WENV183604359
OODL01003488
248567
Thermodesulfobacteriota
CTT
Lys
>WENV183604149
OODL01001369
248567
Thermodesulfobacteriota
CTT
Lys
>WENV183604058
OODL01000977
3406
Thermodesulfobacteriota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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