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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183775918
PPYF01074156
293149
Thermodesulfobacteriota
CAC
Val
>WENV183788899
PPYF01371007
293149
Thermodesulfobacteriota
CAC
Val
>WENV183775894
PPYF01073506
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183779455
PPYF01134932
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183782848
PPYF01220231
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183784764
PPYF01267556
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183786975
PPYF01309611
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183787296
PPYF01320053
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183788497
PPYF01366582
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183788998
PPYF01372555
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183790046
PPYF01395895
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183791574
PPYF01437698
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183786955
PPYF01309199
406378
Thermodesulfobacteriota
CCC
Gly
>WENV183788911
PPYF01371078
406378
Thermodesulfobacteriota
CCC
Gly
>WENV183775865
PPYF01072735
295466
Thermodesulfobacteriota
CGC
Ala
>WENV183788710
PPYF01370303
295466
Thermodesulfobacteriota
CGC
Ala
>WENV183775695
PPYF01069129
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183787097
PPYF01312381
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183787098
PPYF01312381
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183788906
PPYF01371059
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183775801
PPYF01071461
289834
Thermodesulfobacteriota
GAA
Phe
>WENV183787078
PPYF01312039
289834
Thermodesulfobacteriota
GAA
Phe
>WENV183788890
PPYF01370954
289834
Thermodesulfobacteriota
GAA
Phe
>WENV183783455
PPYF01229638
183761
Thermodesulfobacteriota
GAT
Ile
>WENV183785039
PPYF01268831
183761
Thermodesulfobacteriota
GAT
Ile
>WENV183787268
PPYF01318811
183761
Thermodesulfobacteriota
GAT
Ile
>WENV183788367
PPYF01358492
183761
Thermodesulfobacteriota
GAT
Ile
>WENV183789941
PPYF01391561
183761
Thermodesulfobacteriota
GAT
Ile
>WENV183792057
PPYF01448101
183761
Thermodesulfobacteriota
GAT
Ile
>WENV183792832
PPYF01463700
183761
Thermodesulfobacteriota
GAT
Ile
>WENV183775398
PPYF01065798
485131
Thermodesulfobacteriota
GCA
Cys
>WENV183787641
PPYF01340163
294203
Thermodesulfobacteriota
GGC
Ala
>WENV183775981
PPYF01076041
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183779192
PPYF01130475
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183782890
PPYF01220400
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183784699
PPYF01267366
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183787063
PPYF01311702
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183787138
PPYF01313796
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183787716
PPYF01348101
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183788273
PPYF01354577
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183789017
PPYF01372971
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183790120
PPYF01400929
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183791631
PPYF01437905
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183792929
PPYF01465751
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183776151
PPYF01083712
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV183786973
PPYF01309611
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV183788960
PPYF01372018
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV183775797
PPYF01071405
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183779755
PPYF01150973
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183786502
PPYF01304734
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183787241
PPYF01317454
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183788920
PPYF01371181
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183789142
PPYF01384461
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183776159
PPYF01083966
407608
Thermodesulfobacteriota
TTG
Gln
>WENV183787283
PPYF01319349
407608
Thermodesulfobacteriota
TTG
Gln
>WENV183788806
PPYF01370465
407608
Thermodesulfobacteriota
TTG
Gln
>WENV183775713
PPYF01069369
295271
Thermodesulfobacteriota
TTT
Lys
>WENV183786968
PPYF01309542
295271
Thermodesulfobacteriota
TTT
Lys
>WENV183788893
PPYF01370967
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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