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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181228449
OFEH01000005
178872
Thermoproteota
GGC
Ala
>WENV181228465
OFEH01000027
188427
Thermoproteota
CAT
Met
>WENV181228467
OFEH01000027
152332
Thermoproteota
GCC
Gly
>WENV181228483
OFEH01000045
179001
Thermoproteota
>WENV181228505
OFEH01000087
413405
Thermoproteota
>WENV181228511
OFEH01000094
163878
Thermoproteota
>WENV181228548
OFEH01000160
188428
Thermoproteota
CAT
Met
>WENV181228576
OFEH01000281
238259
Thermoproteota
CAT
Met
>WENV181228592
OFEH01000347
179001
Thermoproteota
>WENV181228602
OFEH01000394
188443
Thermoproteota
GGT
Thr
>WENV181228627
OFEH01000519
238259
Thermoproteota
CAT
Met
>WENV181228674
OFEH01000929
59032
Thermoproteota
>WENV181228701
OFEH01001353
188493
Thermoproteota
CAT
Met
>WENV181228714
OFEH01001462
179001
Thermoproteota
>WENV181228749
OFEH01002835
179001
Thermoproteota
>WENV181228782
OFEH01004652
156117
Thermoproteota
>WENV181228802
OFEH01007579
56377
Thermoproteota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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