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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180015153
FQKF010370478
282890
Thermotogota
CGC
Ala
>WENV180014567
FQKF010049165
178158
Thermotogota
CGG
Pro
>WENV180014413
FQKF010008172
178155
Thermotogota
TCG
Arg
>WENV180014412
FQKF010008172
282887
Thermotogota
GTG
His
>WENV180014374
FQKF010000101
178153
Thermotogota
GCA
Cys
>WENV180014477
FQKF010022611
303760
Thermotogota
>WENV180014667
FQKF010087192
480939
Thermotogota
CTG
Gln
>WENV180014388
FQKF010002080
400172
Thermotogota
CCT
Arg
>WENV180014395
FQKF010003218
399295
Thermotogota
TAC
Val
>WENV180014500
FQKF010028151
178157
Thermotogota
GGG
Pro
>WENV180014394
FQKF010003218
282883
Thermotogota
TTC
Glu
>WENV180014408
FQKF010005773
282889
Thermotogota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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