This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180206489
OBAI01000319
21159
Verrucomicrobiota
GGA
Ser
>WENV180206543
OBAI01000381
75458
Verrucomicrobiota
CAG
Leu
>WENV180206612
OBAI01000539
293095
Verrucomicrobiota
TTT
Lys
>WENV180206676
OBAI01000694
229220
Verrucomicrobiota
CAT
Met
>WENV180206739
OBAI01000891
293125
Verrucomicrobiota
GAA
Phe
>WENV180206740
OBAI01000891
186928
Verrucomicrobiota
TGG
Pro
>WENV180206789
OBAI01001047
406351
Verrucomicrobiota
GTT
Asn
>WENV180206794
OBAI01001061
298263
Verrucomicrobiota
TTC
Glu
>WENV180206847
OBAI01001290
406040
Verrucomicrobiota
CGT
Thr
>WENV180206848
OBAI01001290
293069
Verrucomicrobiota
CTT
Lys
>WENV180206869
OBAI01001386
8960
Verrucomicrobiota
CGA
Ser
>WENV180206870
OBAI01001392
483642
Verrucomicrobiota
CCC
Gly
>WENV180206871
OBAI01001392
507474
Verrucomicrobiota
TCC
Gly
>WENV180206892
OBAI01001527
101463
Verrucomicrobiota
TAA
Leu
>WENV180206893
OBAI01001527
292636
Verrucomicrobiota
>WENV180206894
OBAI01001527
8938
Verrucomicrobiota
GCT
Ser
>WENV180206899
OBAI01001578
101461
Verrucomicrobiota
GTA
Tyr
>WENV180206900
OBAI01001579
298263
Verrucomicrobiota
TTC
Glu
>WENV180206901
OBAI01001579
406037
Verrucomicrobiota
GTG
His
>WENV180206902
OBAI01001579
293105
Verrucomicrobiota
CAT
Met
>WENV180206914
OBAI01001655
101600
Verrucomicrobiota
AAG
Leu
>WENV180206945
OBAI01001766
406368
Verrucomicrobiota
TTG
Gln
>WENV180206967
OBAI01001971
405940
Verrucomicrobiota
GGT
Thr
>WENV180206980
OBAI01002018
303305
Verrucomicrobiota
GGC
Ala
>WENV180207011
OBAI01002245
406342
Verrucomicrobiota
CAT
Met
>WENV180207040
OBAI01002541
157427
Verrucomicrobiota
GTC
Asp
>WENV180207076
OBAI01002869
187556
Verrucomicrobiota
GGG
Pro
>WENV180207082
OBAI01002923
157427
Verrucomicrobiota
GTC
Asp
>WENV180207084
OBAI01002952
406350
Verrucomicrobiota
TGT
Thr
>WENV180207091
OBAI01003070
148006
Verrucomicrobiota
CAA
Leu
>WENV180207149
OBAI01003679
405901
Verrucomicrobiota
GCC
Gly
>WENV180207189
OBAI01004031
187548
Verrucomicrobiota
TCT
Arg
>WENV180207190
OBAI01004052
406346
Verrucomicrobiota
TAC
Val
>WENV180207206
OBAI01004215
57652
Verrucomicrobiota
TGA
Ser
>WENV180207212
OBAI01004282
406360
Verrucomicrobiota
GAC
Val
>WENV180207258
OBAI01004840
120352
Verrucomicrobiota
TAG
Leu
>WENV180207284
OBAI01005169
406369
Verrucomicrobiota
CCG
Arg
>WENV180207288
OBAI01005277
293079
Verrucomicrobiota
CGC
Ala
>WENV180207361
OBAI01006317
187561
Verrucomicrobiota
CGG
Pro
>WENV180207412
OBAI01007441
406336
Verrucomicrobiota
CCT
Arg
>WENV180207435
OBAI01007962
298263
Verrucomicrobiota
TTC
Glu
>WENV180207593
OBAI01013030
406039
Verrucomicrobiota
CAC
Val
>WENV180208219
OBAI01094686
406044
Verrucomicrobiota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK