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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180417240
OBVH01003472
101463
Verrucomicrobiota
TAA
Leu
>WENV180417241
OBVH01003472
292636
Verrucomicrobiota
>WENV180417309
OBVH01007159
406369
Verrucomicrobiota
CCG
Arg
>WENV180417311
OBVH01007447
187556
Verrucomicrobiota
GGG
Pro
>WENV180417313
OBVH01007619
157427
Verrucomicrobiota
GTC
Asp
>WENV180417338
OBVH01011205
293079
Verrucomicrobiota
CGC
Ala
>WENV180417354
OBVH01012168
406368
Verrucomicrobiota
TTG
Gln
>WENV180417387
OBVH01016839
101461
Verrucomicrobiota
GTA
Tyr
>WENV180417394
OBVH01017828
8960
Verrucomicrobiota
CGA
Ser
>WENV180417395
OBVH01017910
405940
Verrucomicrobiota
GGT
Thr
>WENV180417408
OBVH01020079
21159
Verrucomicrobiota
GGA
Ser
>WENV180417427
OBVH01025589
187548
Verrucomicrobiota
TCT
Arg
>WENV180417429
OBVH01025995
303305
Verrucomicrobiota
GGC
Ala
>WENV180417432
OBVH01026905
406350
Verrucomicrobiota
TGT
Thr
>WENV180417433
OBVH01026978
406037
Verrucomicrobiota
GTG
His
>WENV180417442
OBVH01029610
483642
Verrucomicrobiota
CCC
Gly
>WENV180417443
OBVH01029610
507474
Verrucomicrobiota
TCC
Gly
>WENV180417449
OBVH01032593
293105
Verrucomicrobiota
CAT
Met
>WENV180417479
OBVH01043777
405901
Verrucomicrobiota
GCC
Gly
>WENV180417497
OBVH01061445
298263
Verrucomicrobiota
TTC
Glu
>WENV180417513
OBVH01077072
101600
Verrucomicrobiota
AAG
Leu
>WENV180417521
OBVH01083995
293069
Verrucomicrobiota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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