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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180435999
OBWM01006237
246260
Verrucomicrobiota
>WENV180436018
OBWM01007019
82181
Verrucomicrobiota
AAG
Leu
>WENV180436042
OBWM01008198
119661
Verrucomicrobiota
CAA
Leu
>WENV180436195
OBWM01025044
344841
Verrucomicrobiota
CAC
Val
>WENV180436070
OBWM01009404
60880
Verrucomicrobiota
CAG
Leu
>WENV180436125
OBWM01013918
170105
Verrucomicrobiota
CAT
Met
>WENV180436104
OBWM01011957
345115
Verrucomicrobiota
CAT
Met
>WENV180436192
OBWM01024460
246709
Verrucomicrobiota
CAT
Met
>WENV180436149
OBWM01018110
345142
Verrucomicrobiota
CCG
Arg
>WENV180436031
OBWM01007555
246687
Verrucomicrobiota
CGC
Ala
>WENV180436174
OBWM01021821
155268
Verrucomicrobiota
CGG
Pro
>WENV180436186
OBWM01023677
344842
Verrucomicrobiota
CGT
Thr
>WENV180436026
OBWM01007333
344845
Verrucomicrobiota
CTG
Gln
>WENV180436187
OBWM01023677
246677
Verrucomicrobiota
CTT
Lys
>WENV180436131
OBWM01015539
345133
Verrucomicrobiota
GAC
Val
>WENV180436205
OBWM01027608
347038
Verrucomicrobiota
GCC
Gly
>WENV180436109
OBWM01012433
7256
Verrucomicrobiota
GCT
Ser
>WENV180436077
OBWM01009455
17023
Verrucomicrobiota
GGA
Ser
>WENV180436136
OBWM01016167
155264
Verrucomicrobiota
GGG
Pro
>WENV180435920
OBWM01003922
82054
Verrucomicrobiota
GTA
Tyr
>WENV180436130
OBWM01015470
128202
Verrucomicrobiota
GTC
Asp
>WENV180436175
OBWM01021848
344839
Verrucomicrobiota
GTG
His
>WENV180436055
OBWM01009024
345124
Verrucomicrobiota
GTT
Asn
>WENV180436023
OBWM01007189
97755
Verrucomicrobiota
TAG
Leu
>WENV180436270
OBWM01050272
419909
Verrucomicrobiota
TCC
Gly
>WENV180436069
OBWM01009387
46246
Verrucomicrobiota
TGA
Ser
>WENV180436288
OBWM01070314
345123
Verrucomicrobiota
TGT
Thr
>WENV180436112
OBWM01012510
246700
Verrucomicrobiota
TTC
Glu
>WENV180436080
OBWM01009702
345141
Verrucomicrobiota
TTG
Gln
>WENV180436090
OBWM01010002
246701
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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