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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180476817
OBYZ01000009
157427
Verrucomicrobiota
GTC
Asp
>WENV180476821
OBYZ01000009
406044
Verrucomicrobiota
CTG
Gln
>WENV180476819
OBYZ01000009
406039
Verrucomicrobiota
CAC
Val
>WENV180476820
OBYZ01000009
406368
Verrucomicrobiota
TTG
Gln
>WENV180476885
OBYZ01000031
406043
Verrucomicrobiota
GCA
Cys
>WENV180476883
OBYZ01000031
293105
Verrucomicrobiota
CAT
Met
>WENV180476880
OBYZ01000031
405901
Verrucomicrobiota
GCC
Gly
>WENV180476882
OBYZ01000031
406037
Verrucomicrobiota
GTG
His
>WENV180476902
OBYZ01000049
293125
Verrucomicrobiota
GAA
Phe
>WENV180476904
OBYZ01000049
187556
Verrucomicrobiota
GGG
Pro
>WENV180476903
OBYZ01000049
186928
Verrucomicrobiota
TGG
Pro
>WENV180476914
OBYZ01000056
406360
Verrucomicrobiota
GAC
Val
>WENV180476937
OBYZ01000068
101461
Verrucomicrobiota
GTA
Tyr
>WENV180476936
OBYZ01000068
406351
Verrucomicrobiota
GTT
Asn
>WENV180477050
OBYZ01000137
406346
Verrucomicrobiota
TAC
Val
>WENV180477067
OBYZ01000157
406350
Verrucomicrobiota
TGT
Thr
>WENV180477068
OBYZ01000157
293079
Verrucomicrobiota
CGC
Ala
>WENV180477084
OBYZ01000169
8960
Verrucomicrobiota
CGA
Ser
>WENV180477085
OBYZ01000172
406342
Verrucomicrobiota
CAT
Met
>WENV180477106
OBYZ01000198
75458
Verrucomicrobiota
CAG
Leu
>WENV180477109
OBYZ01000203
406336
Verrucomicrobiota
CCT
Arg
>WENV180477110
OBYZ01000204
57652
Verrucomicrobiota
TGA
Ser
>WENV180477128
OBYZ01000222
293069
Verrucomicrobiota
CTT
Lys
>WENV180477129
OBYZ01000222
293069
Verrucomicrobiota
CTT
Lys
>WENV180477127
OBYZ01000222
406040
Verrucomicrobiota
CGT
Thr
>WENV180477130
OBYZ01000222
187561
Verrucomicrobiota
CGG
Pro
>WENV180477163
OBYZ01000247
101463
Verrucomicrobiota
TAA
Leu
>WENV180477164
OBYZ01000247
292636
Verrucomicrobiota
>WENV180477165
OBYZ01000247
8938
Verrucomicrobiota
GCT
Ser
>WENV180477241
OBYZ01000353
120352
Verrucomicrobiota
TAG
Leu
>WENV180477252
OBYZ01000363
405901
Verrucomicrobiota
GCC
Gly
>WENV180477278
OBYZ01000396
405940
Verrucomicrobiota
GGT
Thr
>WENV180477320
OBYZ01000456
229220
Verrucomicrobiota
CAT
Met
>WENV180477340
OBYZ01000504
187548
Verrucomicrobiota
TCT
Arg
>WENV180477377
OBYZ01000550
406369
Verrucomicrobiota
CCG
Arg
>WENV180477381
OBYZ01000565
293095
Verrucomicrobiota
TTT
Lys
>WENV180477393
OBYZ01000610
157427
Verrucomicrobiota
GTC
Asp
>WENV180477404
OBYZ01000665
483642
Verrucomicrobiota
CCC
Gly
>WENV180477441
OBYZ01000811
148006
Verrucomicrobiota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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