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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180630144
OCQT01006543
293125
Verrucomicrobiota
GAA
Phe
>WENV180630546
OCQT01072629
148006
Verrucomicrobiota
CAA
Leu
>WENV180630268
OCQT01022347
101600
Verrucomicrobiota
AAG
Leu
>WENV180630133
OCQT01005051
405901
Verrucomicrobiota
GCC
Gly
>WENV180630076
OCQT01000522
8960
Verrucomicrobiota
CGA
Ser
>WENV180630073
OCQT01000246
157427
Verrucomicrobiota
GTC
Asp
>WENV180630486
OCQT01062906
293079
Verrucomicrobiota
CGC
Ala
>WENV180630391
OCQT01042711
120352
Verrucomicrobiota
TAG
Leu
>WENV180630269
OCQT01022382
292636
Verrucomicrobiota
>WENV180630944
OCQT01278865
298263
Verrucomicrobiota
TTC
Glu
>WENV180630212
OCQT01013668
293069
Verrucomicrobiota
CTT
Lys
>WENV180630213
OCQT01013668
293069
Verrucomicrobiota
CTT
Lys
>WENV180630214
OCQT01013668
293069
Verrucomicrobiota
CTT
Lys
>WENV180630108
OCQT01003214
406336
Verrucomicrobiota
CCT
Arg
>WENV180630163
OCQT01008169
406369
Verrucomicrobiota
CCG
Arg
>WENV180630071
OCQT01000145
405940
Verrucomicrobiota
GGT
Thr
>WENV180630275
OCQT01023202
406044
Verrucomicrobiota
CTG
Gln
>WENV180630969
OCQT01280915
187556
Verrucomicrobiota
GGG
Pro
>WENV180630227
OCQT01017128
406037
Verrucomicrobiota
GTG
His
>WENV180630079
OCQT01000708
187548
Verrucomicrobiota
TCT
Arg
>WENV180630211
OCQT01013668
406040
Verrucomicrobiota
CGT
Thr
>WENV180630075
OCQT01000507
57652
Verrucomicrobiota
TGA
Ser
>WENV180630120
OCQT01004109
75458
Verrucomicrobiota
CAG
Leu
>WENV180630202
OCQT01012852
101461
Verrucomicrobiota
GTA
Tyr
>WENV180630718
OCQT01145458
293095
Verrucomicrobiota
TTT
Lys
>WENV180630274
OCQT01022804
187561
Verrucomicrobiota
CGG
Pro
>WENV180630278
OCQT01024291
303305
Verrucomicrobiota
GGC
Ala
>WENV180630112
OCQT01003561
406346
Verrucomicrobiota
TAC
Val
>WENV180630145
OCQT01006543
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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