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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180710579
ODFM01002990
293079
Verrucomicrobiota
CGC
Ala
>WENV180710595
ODFM01003378
8938
Verrucomicrobiota
GCT
Ser
>WENV180710606
ODFM01003658
75458
Verrucomicrobiota
CAG
Leu
>WENV180710616
ODFM01003830
21159
Verrucomicrobiota
GGA
Ser
>WENV180710658
ODFM01005225
187556
Verrucomicrobiota
GGG
Pro
>WENV180710671
ODFM01005560
101461
Verrucomicrobiota
GTA
Tyr
>WENV180710676
ODFM01005654
293105
Verrucomicrobiota
CAT
Met
>WENV180710681
ODFM01005704
406351
Verrucomicrobiota
GTT
Asn
>WENV180710683
ODFM01005896
303305
Verrucomicrobiota
GGC
Ala
>WENV180710721
ODFM01007390
406039
Verrucomicrobiota
CAC
Val
>WENV180710727
ODFM01007603
101600
Verrucomicrobiota
AAG
Leu
>WENV180710758
ODFM01008805
405940
Verrucomicrobiota
GGT
Thr
>WENV180710764
ODFM01008878
293069
Verrucomicrobiota
CTT
Lys
>WENV180710763
ODFM01008878
406040
Verrucomicrobiota
CGT
Thr
>WENV180710784
ODFM01009513
405901
Verrucomicrobiota
GCC
Gly
>WENV180710812
ODFM01010809
406369
Verrucomicrobiota
CCG
Arg
>WENV180710814
ODFM01010928
229220
Verrucomicrobiota
CAT
Met
>WENV180710822
ODFM01011420
483642
Verrucomicrobiota
CCC
Gly
>WENV180710821
ODFM01011420
489412
Verrucomicrobiota
TCC
Gly
>WENV180710840
ODFM01012435
187561
Verrucomicrobiota
CGG
Pro
>WENV180710847
ODFM01013314
406044
Verrucomicrobiota
CTG
Gln
>WENV180710848
ODFM01013325
406043
Verrucomicrobiota
GCA
Cys
>WENV180710849
ODFM01013325
298263
Verrucomicrobiota
TTC
Glu
>WENV180710852
ODFM01013478
406346
Verrucomicrobiota
TAC
Val
>WENV180710854
ODFM01013581
8960
Verrucomicrobiota
CGA
Ser
>WENV180710861
ODFM01014372
57652
Verrucomicrobiota
TGA
Ser
>WENV180710888
ODFM01017235
406360
Verrucomicrobiota
GAC
Val
>WENV180710890
ODFM01017366
406368
Verrucomicrobiota
TTG
Gln
>WENV180710897
ODFM01018561
187548
Verrucomicrobiota
TCT
Arg
>WENV180710898
ODFM01018630
293095
Verrucomicrobiota
TTT
Lys
>WENV180710911
ODFM01019656
406336
Verrucomicrobiota
CCT
Arg
>WENV180710932
ODFM01022568
406350
Verrucomicrobiota
TGT
Thr
>WENV180711004
ODFM01030281
406342
Verrucomicrobiota
CAT
Met
>WENV180711122
ODFM01055469
101463
Verrucomicrobiota
TAA
Leu
>WENV180711195
ODFM01077501
292636
Verrucomicrobiota
>WENV180711234
ODFM01098273
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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