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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180956774
ODUK01003574
187548
Verrucomicrobiota
TCT
Arg
>WENV180956808
ODUK01003956
406040
Verrucomicrobiota
CGT
Thr
>WENV180956809
ODUK01003956
293069
Verrucomicrobiota
CTT
Lys
>WENV180956810
ODUK01003956
293069
Verrucomicrobiota
CTT
Lys
>WENV180956814
ODUK01004047
406336
Verrucomicrobiota
CCT
Arg
>WENV180956853
ODUK01004596
157427
Verrucomicrobiota
GTC
Asp
>WENV180956862
ODUK01004758
405940
Verrucomicrobiota
GGT
Thr
>WENV180956909
ODUK01005440
406342
Verrucomicrobiota
CAT
Met
>WENV180956947
ODUK01006122
8960
Verrucomicrobiota
CGA
Ser
>WENV180956963
ODUK01006588
187556
Verrucomicrobiota
GGG
Pro
>WENV180956965
ODUK01006595
292636
Verrucomicrobiota
>WENV180957002
ODUK01007342
293079
Verrucomicrobiota
CGC
Ala
>WENV180957006
ODUK01007440
406346
Verrucomicrobiota
TAC
Val
>WENV180957009
ODUK01007611
406039
Verrucomicrobiota
CAC
Val
>WENV180957039
ODUK01008465
187561
Verrucomicrobiota
CGG
Pro
>WENV180957046
ODUK01008764
148006
Verrucomicrobiota
CAA
Leu
>WENV180957078
ODUK01010044
75458
Verrucomicrobiota
CAG
Leu
>WENV180957079
ODUK01010072
405901
Verrucomicrobiota
GCC
Gly
>WENV180957085
ODUK01010241
406350
Verrucomicrobiota
TGT
Thr
>WENV180957087
ODUK01010483
406044
Verrucomicrobiota
CTG
Gln
>WENV180957100
ODUK01011321
406037
Verrucomicrobiota
GTG
His
>WENV180957118
ODUK01012054
57652
Verrucomicrobiota
TGA
Ser
>WENV180957121
ODUK01012179
406351
Verrucomicrobiota
GTT
Asn
>WENV180957165
ODUK01014955
101461
Verrucomicrobiota
GTA
Tyr
>WENV180957169
ODUK01015202
8938
Verrucomicrobiota
GCT
Ser
>WENV180957210
ODUK01018398
101463
Verrucomicrobiota
TAA
Leu
>WENV180957233
ODUK01020465
293095
Verrucomicrobiota
TTT
Lys
>WENV180957322
ODUK01029080
293105
Verrucomicrobiota
CAT
Met
>WENV180957329
ODUK01029620
406360
Verrucomicrobiota
GAC
Val
>WENV180957358
ODUK01032760
405901
Verrucomicrobiota
GCC
Gly
>WENV180957379
ODUK01037465
483642
Verrucomicrobiota
CCC
Gly
>WENV180957456
ODUK01049776
406368
Verrucomicrobiota
TTG
Gln
>WENV180957481
ODUK01055014
406369
Verrucomicrobiota
CCG
Arg
>WENV180957562
ODUK01076149
293125
Verrucomicrobiota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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