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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181071431
OEAL01005557
204388
Verrucomicrobiota
CAT
Met
>WENV181071441
OEAL01007303
406350
Verrucomicrobiota
TGT
Thr
>WENV181071391
OEAL01000460
148006
Verrucomicrobiota
CAA
Leu
>WENV181071409
OEAL01002148
120352
Verrucomicrobiota
TAG
Leu
>WENV181071440
OEAL01007190
298263
Verrucomicrobiota
TTC
Glu
>WENV181071510
OEAL01029071
406044
Verrucomicrobiota
CTG
Gln
>WENV181071392
OEAL01000465
187556
Verrucomicrobiota
GGG
Pro
>WENV181071459
OEAL01013876
57652
Verrucomicrobiota
TGA
Ser
>WENV181071399
OEAL01000867
101461
Verrucomicrobiota
GTA
Tyr
>WENV181071429
OEAL01005271
187561
Verrucomicrobiota
CGG
Pro
>WENV181071505
OEAL01027862
406346
Verrucomicrobiota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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