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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181147345
OEHT01000016
292636
Verrucomicrobiota
>WENV181147341
OEHT01000016
148006
Verrucomicrobiota
CAA
Leu
>WENV181147499
OEHT01000105
406039
Verrucomicrobiota
CAC
Val
>WENV181147816
OEHT01000547
75458
Verrucomicrobiota
CAG
Leu
>WENV181147508
OEHT01000116
293105
Verrucomicrobiota
CAT
Met
>WENV181147845
OEHT01000614
229220
Verrucomicrobiota
CAT
Met
>WENV181147509
OEHT01000116
406342
Verrucomicrobiota
CAT
Met
>WENV181147426
OEHT01000052
483642
Verrucomicrobiota
CCC
Gly
>WENV181147427
OEHT01000052
406369
Verrucomicrobiota
CCG
Arg
>WENV181147343
OEHT01000016
406336
Verrucomicrobiota
CCT
Arg
>WENV181147550
OEHT01000172
8960
Verrucomicrobiota
CGA
Ser
>WENV181147461
OEHT01000077
293079
Verrucomicrobiota
CGC
Ala
>WENV181147647
OEHT01000283
187561
Verrucomicrobiota
CGG
Pro
>WENV181147644
OEHT01000283
406040
Verrucomicrobiota
CGT
Thr
>WENV181147374
OEHT01000028
406044
Verrucomicrobiota
CTG
Gln
>WENV181147645
OEHT01000283
293069
Verrucomicrobiota
CTT
Lys
>WENV181147646
OEHT01000283
293069
Verrucomicrobiota
CTT
Lys
>WENV181147429
OEHT01000052
293125
Verrucomicrobiota
GAA
Phe
>WENV181147779
OEHT01000471
406360
Verrucomicrobiota
GAC
Val
>WENV181148485
OEHT01004199
406043
Verrucomicrobiota
GCA
Cys
>WENV181147505
OEHT01000116
405901
Verrucomicrobiota
GCC
Gly
>WENV181147548
OEHT01000167
405901
Verrucomicrobiota
GCC
Gly
>WENV181147346
OEHT01000016
8938
Verrucomicrobiota
GCT
Ser
>WENV181148088
OEHT01001513
21159
Verrucomicrobiota
GGA
Ser
>WENV181147376
OEHT01000028
303305
Verrucomicrobiota
GGC
Ala
>WENV181147454
OEHT01000070
187556
Verrucomicrobiota
GGG
Pro
>WENV181147527
OEHT01000141
405940
Verrucomicrobiota
GGT
Thr
>WENV181147531
OEHT01000144
101461
Verrucomicrobiota
GTA
Tyr
>WENV181147375
OEHT01000028
157427
Verrucomicrobiota
GTC
Asp
>WENV181147881
OEHT01000693
157427
Verrucomicrobiota
GTC
Asp
>WENV181147507
OEHT01000116
406037
Verrucomicrobiota
GTG
His
>WENV181147530
OEHT01000144
406351
Verrucomicrobiota
GTT
Asn
>WENV181147344
OEHT01000016
101463
Verrucomicrobiota
TAA
Leu
>WENV181147503
OEHT01000113
406346
Verrucomicrobiota
TAC
Val
>WENV181147342
OEHT01000016
120352
Verrucomicrobiota
TAG
Leu
>WENV181147428
OEHT01000052
507474
Verrucomicrobiota
TCC
Gly
>WENV181147300
OEHT01000005
187548
Verrucomicrobiota
TCT
Arg
>WENV181147504
OEHT01000116
57652
Verrucomicrobiota
TGA
Ser
>WENV181147430
OEHT01000052
186928
Verrucomicrobiota
TGG
Pro
>WENV181147460
OEHT01000077
406350
Verrucomicrobiota
TGT
Thr
>WENV181147459
OEHT01000077
298263
Verrucomicrobiota
TTC
Glu
>WENV181147462
OEHT01000077
298263
Verrucomicrobiota
TTC
Glu
>WENV181147506
OEHT01000116
298263
Verrucomicrobiota
TTC
Glu
>WENV181147373
OEHT01000028
406368
Verrucomicrobiota
TTG
Gln
>WENV181147299
OEHT01000005
293095
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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