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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181299902
OFHN01000001
119661
Verrucomicrobiota
CAA
Leu
>WENV181299903
OFHN01000001
97755
Verrucomicrobiota
TAG
Leu
>WENV181299904
OFHN01000001
155264
Verrucomicrobiota
GGG
Pro
>WENV181299905
OFHN01000001
414625
Verrucomicrobiota
CCC
Gly
>WENV181299906
OFHN01000001
345142
Verrucomicrobiota
CCG
Arg
>WENV181299907
OFHN01000001
419909
Verrucomicrobiota
TCC
Gly
>WENV181299908
OFHN01000001
246728
Verrucomicrobiota
GAA
Phe
>WENV181299909
OFHN01000001
154693
Verrucomicrobiota
TGG
Pro
>WENV181299910
OFHN01000001
345110
Verrucomicrobiota
CCT
Arg
>WENV181299911
OFHN01000001
82056
Verrucomicrobiota
TAA
Leu
>WENV181299912
OFHN01000001
246260
Verrucomicrobiota
>WENV181299913
OFHN01000001
7256
Verrucomicrobiota
GCT
Ser
>WENV181299940
OFHN01000005
128202
Verrucomicrobiota
GTC
Asp
>WENV181299942
OFHN01000005
344841
Verrucomicrobiota
CAC
Val
>WENV181299943
OFHN01000005
345141
Verrucomicrobiota
TTG
Gln
>WENV181299944
OFHN01000005
344845
Verrucomicrobiota
CTG
Gln
>WENV181299945
OFHN01000005
345133
Verrucomicrobiota
GAC
Val
>WENV181299984
OFHN01000020
246701
Verrucomicrobiota
TTT
Lys
>WENV181299989
OFHN01000023
344751
Verrucomicrobiota
GGT
Thr
>WENV181300005
OFHN01000033
344842
Verrucomicrobiota
CGT
Thr
>WENV181300006
OFHN01000033
246677
Verrucomicrobiota
CTT
Lys
>WENV181300007
OFHN01000033
246677
Verrucomicrobiota
CTT
Lys
>WENV181300008
OFHN01000033
155268
Verrucomicrobiota
CGG
Pro
>WENV181300012
OFHN01000035
155256
Verrucomicrobiota
TCT
Arg
>WENV181300013
OFHN01000037
345119
Verrucomicrobiota
TAC
Val
>WENV181300016
OFHN01000039
246700
Verrucomicrobiota
TTC
Glu
>WENV181300017
OFHN01000039
82181
Verrucomicrobiota
AAG
Leu
>WENV181300018
OFHN01000039
344844
Verrucomicrobiota
GCA
Cys
>WENV181300019
OFHN01000039
246700
Verrucomicrobiota
TTC
Glu
>WENV181300020
OFHN01000039
345123
Verrucomicrobiota
TGT
Thr
>WENV181300021
OFHN01000040
345124
Verrucomicrobiota
GTT
Asn
>WENV181300022
OFHN01000040
82054
Verrucomicrobiota
GTA
Tyr
>WENV181300066
OFHN01000080
7274
Verrucomicrobiota
CGA
Ser
>WENV181300101
OFHN01000149
17023
Verrucomicrobiota
GGA
Ser
>WENV181300102
OFHN01000149
128202
Verrucomicrobiota
GTC
Asp
>WENV181300125
OFHN01000192
368497
Verrucomicrobiota
GCC
Gly
>WENV181300126
OFHN01000192
345115
Verrucomicrobiota
CAT
Met
>WENV181300146
OFHN01000228
170105
Verrucomicrobiota
CAT
Met
>WENV181300148
OFHN01000235
46246
Verrucomicrobiota
TGA
Ser
>WENV181300158
OFHN01000279
246687
Verrucomicrobiota
CGC
Ala
>WENV181300161
OFHN01000283
368497
Verrucomicrobiota
GCC
Gly
>WENV181300364
OFHN01001069
246700
Verrucomicrobiota
TTC
Glu
>WENV181300365
OFHN01001069
344839
Verrucomicrobiota
GTG
His
>WENV181300366
OFHN01001069
246709
Verrucomicrobiota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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