This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181508825
OGGQ01001578
292636
Verrucomicrobiota
>WENV181509624
OGGQ01007683
101600
Verrucomicrobiota
AAG
Leu
>WENV181509591
OGGQ01007120
148006
Verrucomicrobiota
CAA
Leu
>WENV181508886
OGGQ01001780
406039
Verrucomicrobiota
CAC
Val
>WENV181509380
OGGQ01004242
75458
Verrucomicrobiota
CAG
Leu
>WENV181508998
OGGQ01002243
293105
Verrucomicrobiota
CAT
Met
>WENV181509500
OGGQ01005872
229220
Verrucomicrobiota
CAT
Met
>WENV181509394
OGGQ01004459
483642
Verrucomicrobiota
CCC
Gly
>WENV181509623
OGGQ01007629
406369
Verrucomicrobiota
CCG
Arg
>WENV181509671
OGGQ01008682
406336
Verrucomicrobiota
CCT
Arg
>WENV181509980
OGGQ01020635
8960
Verrucomicrobiota
CGA
Ser
>WENV181509490
OGGQ01005627
293079
Verrucomicrobiota
CGC
Ala
>WENV181509790
OGGQ01011604
187561
Verrucomicrobiota
CGG
Pro
>WENV181509604
OGGQ01007236
406040
Verrucomicrobiota
CGT
Thr
>WENV181509501
OGGQ01005894
406044
Verrucomicrobiota
CTG
Gln
>WENV181509605
OGGQ01007236
293069
Verrucomicrobiota
CTT
Lys
>WENV181509810
OGGQ01012393
293069
Verrucomicrobiota
CTT
Lys
>WENV181509230
OGGQ01003353
293125
Verrucomicrobiota
GAA
Phe
>WENV181509390
OGGQ01004412
406360
Verrucomicrobiota
GAC
Val
>WENV181510007
OGGQ01022121
406043
Verrucomicrobiota
GCA
Cys
>WENV181509979
OGGQ01020590
405901
Verrucomicrobiota
GCC
Gly
>WENV181508826
OGGQ01001578
8938
Verrucomicrobiota
GCT
Ser
>WENV181509247
OGGQ01003426
21159
Verrucomicrobiota
GGA
Ser
>WENV181509241
OGGQ01003399
303305
Verrucomicrobiota
GGC
Ala
>WENV181509388
OGGQ01004349
187556
Verrucomicrobiota
GGG
Pro
>WENV181509902
OGGQ01016383
405940
Verrucomicrobiota
GGT
Thr
>WENV181509520
OGGQ01006105
101461
Verrucomicrobiota
GTA
Tyr
>WENV181509400
OGGQ01004514
157427
Verrucomicrobiota
GTC
Asp
>WENV181510102
OGGQ01030688
157427
Verrucomicrobiota
GTC
Asp
>WENV181508997
OGGQ01002243
406037
Verrucomicrobiota
GTG
His
>WENV181509472
OGGQ01005420
406351
Verrucomicrobiota
GTT
Asn
>WENV181508824
OGGQ01001578
101463
Verrucomicrobiota
TAA
Leu
>WENV181509368
OGGQ01004169
406346
Verrucomicrobiota
TAC
Val
>WENV181509497
OGGQ01005810
120352
Verrucomicrobiota
TAG
Leu
>WENV181509395
OGGQ01004459
507474
Verrucomicrobiota
TCC
Gly
>WENV181509283
OGGQ01003657
187548
Verrucomicrobiota
TCT
Arg
>WENV181509339
OGGQ01004061
57652
Verrucomicrobiota
TGA
Ser
>WENV181509231
OGGQ01003353
186928
Verrucomicrobiota
TGG
Pro
>WENV181509718
OGGQ01009781
406350
Verrucomicrobiota
TGT
Thr
>WENV181508996
OGGQ01002243
298263
Verrucomicrobiota
TTC
Glu
>WENV181509870
OGGQ01014833
298263
Verrucomicrobiota
TTC
Glu
>WENV181509733
OGGQ01010300
406368
Verrucomicrobiota
TTG
Gln
>WENV181509046
OGGQ01002460
293095
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK