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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181685313
OGOW01000088
119661
Verrucomicrobiota
CAA
Leu
>WENV181685179
OGOW01000016
155256
Verrucomicrobiota
TCT
Arg
>WENV181685188
OGOW01000025
246701
Verrucomicrobiota
TTT
Lys
>WENV181685242
OGOW01000048
345141
Verrucomicrobiota
TTG
Gln
>WENV181685240
OGOW01000048
345133
Verrucomicrobiota
GAC
Val
>WENV181685276
OGOW01000069
82054
Verrucomicrobiota
GTA
Tyr
>WENV181685357
OGOW01000122
246677
Verrucomicrobiota
CTT
Lys
>WENV181686188
OGOW01006703
344844
Verrucomicrobiota
GCA
Cys
>WENV181685439
OGOW01000226
155264
Verrucomicrobiota
GGG
Pro
>WENV181685408
OGOW01000183
344845
Verrucomicrobiota
CTG
Gln
>WENV181685693
OGOW01000923
128202
Verrucomicrobiota
GTC
Asp
>WENV181685409
OGOW01000183
128202
Verrucomicrobiota
GTC
Asp
>WENV181685755
OGOW01001281
414625
Verrucomicrobiota
CCC
Gly
>WENV181685666
OGOW01000856
46246
Verrucomicrobiota
TGA
Ser
>WENV181685577
OGOW01000534
97755
Verrucomicrobiota
TAG
Leu
>WENV181685319
OGOW01000090
246700
Verrucomicrobiota
TTC
Glu
>WENV181685278
OGOW01000070
246700
Verrucomicrobiota
TTC
Glu
>WENV181685277
OGOW01000070
246700
Verrucomicrobiota
TTC
Glu
>WENV181685280
OGOW01000070
246687
Verrucomicrobiota
CGC
Ala
>WENV181685754
OGOW01001281
419909
Verrucomicrobiota
TCC
Gly
>WENV181685323
OGOW01000091
344841
Verrucomicrobiota
CAC
Val
>WENV181685607
OGOW01000676
60880
Verrucomicrobiota
CAG
Leu
>WENV181685314
OGOW01000088
82056
Verrucomicrobiota
TAA
Leu
>WENV181685356
OGOW01000122
344842
Verrucomicrobiota
CGT
Thr
>WENV181685641
OGOW01000737
170105
Verrucomicrobiota
CAT
Met
>WENV181685351
OGOW01000114
287733
Verrucomicrobiota
CCA
Trp
>WENV181685279
OGOW01000070
345123
Verrucomicrobiota
TGT
Thr
>WENV181685372
OGOW01000145
345110
Verrucomicrobiota
CCT
Arg
>WENV181685320
OGOW01000090
344839
Verrucomicrobiota
GTG
His
>WENV181685373
OGOW01000146
7274
Verrucomicrobiota
CGA
Ser
>WENV181685315
OGOW01000088
246260
Verrucomicrobiota
>WENV181685358
OGOW01000122
155268
Verrucomicrobiota
CGG
Pro
>WENV181685467
OGOW01000268
82181
Verrucomicrobiota
AAG
Leu
>WENV181685440
OGOW01000226
246728
Verrucomicrobiota
GAA
Phe
>WENV181685316
OGOW01000088
7256
Verrucomicrobiota
GCT
Ser
>WENV181685322
OGOW01000090
345115
Verrucomicrobiota
CAT
Met
>WENV181685243
OGOW01000048
345119
Verrucomicrobiota
TAC
Val
>WENV181685275
OGOW01000069
345124
Verrucomicrobiota
GTT
Asn
>WENV181685236
OGOW01000041
17023
Verrucomicrobiota
GGA
Ser
>WENV181685324
OGOW01000091
368497
Verrucomicrobiota
GCC
Gly
>WENV181685318
OGOW01000090
368497
Verrucomicrobiota
GCC
Gly
>WENV181685368
OGOW01000140
345142
Verrucomicrobiota
CCG
Arg
>WENV181685321
OGOW01000090
246709
Verrucomicrobiota
CAT
Met
>WENV181685441
OGOW01000226
154693
Verrucomicrobiota
TGG
Pro
>WENV181685350
OGOW01000114
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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