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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181824390
OGUK01001535
119661
Verrucomicrobiota
CAA
Leu
>WENV181824461
OGUK01002553
155256
Verrucomicrobiota
TCT
Arg
>WENV181824109
OGUK01000138
246701
Verrucomicrobiota
TTT
Lys
>WENV181824169
OGUK01000286
345141
Verrucomicrobiota
TTG
Gln
>WENV181824323
OGUK01000997
345133
Verrucomicrobiota
GAC
Val
>WENV181824120
OGUK01000166
82054
Verrucomicrobiota
GTA
Tyr
>WENV181824178
OGUK01000301
246677
Verrucomicrobiota
CTT
Lys
>WENV181824580
OGUK01003994
344844
Verrucomicrobiota
GCA
Cys
>WENV181824349
OGUK01001230
155264
Verrucomicrobiota
GGG
Pro
>WENV181824337
OGUK01001106
344845
Verrucomicrobiota
CTG
Gln
>WENV181824384
OGUK01001469
128202
Verrucomicrobiota
GTC
Asp
>WENV181824270
OGUK01000641
128202
Verrucomicrobiota
GTC
Asp
>WENV181824203
OGUK01000343
414625
Verrucomicrobiota
CCC
Gly
>WENV181824372
OGUK01001437
46246
Verrucomicrobiota
TGA
Ser
>WENV181824062
OGUK01000063
97755
Verrucomicrobiota
TAG
Leu
>WENV181824122
OGUK01000168
246700
Verrucomicrobiota
TTC
Glu
>WENV181824486
OGUK01002974
246687
Verrucomicrobiota
CGC
Ala
>WENV181824119
OGUK01000164
344841
Verrucomicrobiota
CAC
Val
>WENV181824295
OGUK01000784
60880
Verrucomicrobiota
CAG
Leu
>WENV181824218
OGUK01000394
82056
Verrucomicrobiota
TAA
Leu
>WENV181824177
OGUK01000301
344842
Verrucomicrobiota
CGT
Thr
>WENV181824472
OGUK01002705
170105
Verrucomicrobiota
CAT
Met
>WENV181824343
OGUK01001168
287733
Verrucomicrobiota
CCA
Trp
>WENV181824396
OGUK01001620
345123
Verrucomicrobiota
TGT
Thr
>WENV181824063
OGUK01000063
345110
Verrucomicrobiota
CCT
Arg
>WENV181824123
OGUK01000168
344839
Verrucomicrobiota
GTG
His
>WENV181824381
OGUK01001455
7274
Verrucomicrobiota
CGA
Ser
>WENV181824219
OGUK01000394
246260
Verrucomicrobiota
>WENV181824179
OGUK01000301
155268
Verrucomicrobiota
CGG
Pro
>WENV181824140
OGUK01000218
246728
Verrucomicrobiota
GAA
Phe
>WENV181824351
OGUK01001235
7256
Verrucomicrobiota
GCT
Ser
>WENV181824403
OGUK01001711
345115
Verrucomicrobiota
CAT
Met
>WENV181824707
OGUK01007438
345119
Verrucomicrobiota
TAC
Val
>WENV181824449
OGUK01002350
345124
Verrucomicrobiota
GTT
Asn
>WENV181824542
OGUK01003592
368497
Verrucomicrobiota
GCC
Gly
>WENV181824427
OGUK01001980
368497
Verrucomicrobiota
GCC
Gly
>WENV181824442
OGUK01002217
345142
Verrucomicrobiota
CCG
Arg
>WENV181824124
OGUK01000168
246709
Verrucomicrobiota
CAT
Met
>WENV181824141
OGUK01000218
154693
Verrucomicrobiota
TGG
Pro
>WENV181824342
OGUK01001168
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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