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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181864503
OGWU01000675
292636
Verrucomicrobiota
>WENV181864896
OGWU01003782
101600
Verrucomicrobiota
AAG
Leu
>WENV181864516
OGWU01000707
148006
Verrucomicrobiota
CAA
Leu
>WENV181864341
OGWU01000208
406039
Verrucomicrobiota
CAC
Val
>WENV181864592
OGWU01000993
75458
Verrucomicrobiota
CAG
Leu
>WENV181864443
OGWU01000510
293105
Verrucomicrobiota
CAT
Met
>WENV181864441
OGWU01000503
229220
Verrucomicrobiota
CAT
Met
>WENV181864577
OGWU01000962
406342
Verrucomicrobiota
CAT
Met
>WENV181864683
OGWU01001467
483642
Verrucomicrobiota
CCC
Gly
>WENV181864799
OGWU01002436
406369
Verrucomicrobiota
CCG
Arg
>WENV181864261
OGWU01000036
406336
Verrucomicrobiota
CCT
Arg
>WENV181864400
OGWU01000337
8960
Verrucomicrobiota
CGA
Ser
>WENV181864460
OGWU01000543
293079
Verrucomicrobiota
CGC
Ala
>WENV181864311
OGWU01000149
187561
Verrucomicrobiota
CGG
Pro
>WENV181864308
OGWU01000149
406040
Verrucomicrobiota
CGT
Thr
>WENV181864836
OGWU01002858
406044
Verrucomicrobiota
CTG
Gln
>WENV181864309
OGWU01000149
293069
Verrucomicrobiota
CTT
Lys
>WENV181864310
OGWU01000149
293069
Verrucomicrobiota
CTT
Lys
>WENV181864772
OGWU01002153
293125
Verrucomicrobiota
GAA
Phe
>WENV181864456
OGWU01000532
406360
Verrucomicrobiota
GAC
Val
>WENV181864391
OGWU01000314
406043
Verrucomicrobiota
GCA
Cys
>WENV181864493
OGWU01000636
405901
Verrucomicrobiota
GCC
Gly
>WENV181864919
OGWU01004101
405901
Verrucomicrobiota
GCC
Gly
>WENV181864504
OGWU01000675
8938
Verrucomicrobiota
GCT
Ser
>WENV181864411
OGWU01000366
21159
Verrucomicrobiota
GGA
Ser
>WENV181864455
OGWU01000524
303305
Verrucomicrobiota
GGC
Ala
>WENV181864787
OGWU01002257
187556
Verrucomicrobiota
GGG
Pro
>WENV181864708
OGWU01001637
405940
Verrucomicrobiota
GGT
Thr
>WENV181864390
OGWU01000311
101461
Verrucomicrobiota
GTA
Tyr
>WENV181864554
OGWU01000872
157427
Verrucomicrobiota
GTC
Asp
>WENV181864663
OGWU01001381
157427
Verrucomicrobiota
GTC
Asp
>WENV181864442
OGWU01000510
406037
Verrucomicrobiota
GTG
His
>WENV181864389
OGWU01000311
406351
Verrucomicrobiota
GTT
Asn
>WENV181864675
OGWU01001425
101463
Verrucomicrobiota
TAA
Leu
>WENV181864586
OGWU01000980
406346
Verrucomicrobiota
TAC
Val
>WENV181865077
OGWU01007444
120352
Verrucomicrobiota
TAG
Leu
>WENV181864684
OGWU01001467
507474
Verrucomicrobiota
TCC
Gly
>WENV181864857
OGWU01003146
187548
Verrucomicrobiota
TCT
Arg
>WENV181865000
OGWU01005811
57652
Verrucomicrobiota
TGA
Ser
>WENV181864773
OGWU01002153
186928
Verrucomicrobiota
TGG
Pro
>WENV181865071
OGWU01007237
406350
Verrucomicrobiota
TGT
Thr
>WENV181864879
OGWU01003530
298263
Verrucomicrobiota
TTC
Glu
>WENV181864528
OGWU01000763
406368
Verrucomicrobiota
TTG
Gln
>WENV181864610
OGWU01001148
293095
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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