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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181882520
OGXI01000013
246260
Verrucomicrobiota
>WENV181882789
OGXI01000448
82181
Verrucomicrobiota
AAG
Leu
>WENV181882518
OGXI01000013
119661
Verrucomicrobiota
CAA
Leu
>WENV181882597
OGXI01000083
344841
Verrucomicrobiota
CAC
Val
>WENV181882783
OGXI01000441
60880
Verrucomicrobiota
CAG
Leu
>WENV181882915
OGXI01000714
170105
Verrucomicrobiota
CAT
Met
>WENV181882692
OGXI01000232
345115
Verrucomicrobiota
CAT
Met
>WENV181882813
OGXI01000508
246709
Verrucomicrobiota
CAT
Met
>WENV181882574
OGXI01000055
287733
Verrucomicrobiota
CCA
Trp
>WENV181882566
OGXI01000045
414625
Verrucomicrobiota
CCC
Gly
>WENV181882567
OGXI01000045
345142
Verrucomicrobiota
CCG
Arg
>WENV181882515
OGXI01000012
345110
Verrucomicrobiota
CCT
Arg
>WENV181882571
OGXI01000049
7274
Verrucomicrobiota
CGA
Ser
>WENV181882981
OGXI01001025
246687
Verrucomicrobiota
CGC
Ala
>WENV181882580
OGXI01000060
155268
Verrucomicrobiota
CGG
Pro
>WENV181882578
OGXI01000060
344842
Verrucomicrobiota
CGT
Thr
>WENV181882501
OGXI01000001
344845
Verrucomicrobiota
CTG
Gln
>WENV181882579
OGXI01000060
246677
Verrucomicrobiota
CTT
Lys
>WENV181882569
OGXI01000045
246728
Verrucomicrobiota
GAA
Phe
>WENV181882502
OGXI01000001
345133
Verrucomicrobiota
GAC
Val
>WENV181882681
OGXI01000215
344844
Verrucomicrobiota
GCA
Cys
>WENV181882934
OGXI01000798
368497
Verrucomicrobiota
GCC
Gly
>WENV181882810
OGXI01000508
368497
Verrucomicrobiota
GCC
Gly
>WENV181882521
OGXI01000013
7256
Verrucomicrobiota
GCT
Ser
>WENV181882575
OGXI01000056
17023
Verrucomicrobiota
GGA
Ser
>WENV181882510
OGXI01000006
155264
Verrucomicrobiota
GGG
Pro
>WENV181882573
OGXI01000055
344751
Verrucomicrobiota
GGT
Thr
>WENV181882555
OGXI01000036
82054
Verrucomicrobiota
GTA
Tyr
>WENV181882854
OGXI01000584
128202
Verrucomicrobiota
GTC
Asp
>WENV181882504
OGXI01000001
128202
Verrucomicrobiota
GTC
Asp
>WENV181882812
OGXI01000508
344839
Verrucomicrobiota
GTG
His
>WENV181882554
OGXI01000036
345124
Verrucomicrobiota
GTT
Asn
>WENV181882519
OGXI01000013
82056
Verrucomicrobiota
TAA
Leu
>WENV181882503
OGXI01000001
345119
Verrucomicrobiota
TAC
Val
>WENV181882516
OGXI01000012
97755
Verrucomicrobiota
TAG
Leu
>WENV181882568
OGXI01000045
419909
Verrucomicrobiota
TCC
Gly
>WENV181883115
OGXI01001793
155256
Verrucomicrobiota
TCT
Arg
>WENV181882956
OGXI01000902
46246
Verrucomicrobiota
TGA
Ser
>WENV181882570
OGXI01000045
154693
Verrucomicrobiota
TGG
Pro
>WENV181882683
OGXI01000215
345123
Verrucomicrobiota
TGT
Thr
>WENV181882811
OGXI01000508
246700
Verrucomicrobiota
TTC
Glu
>WENV181882682
OGXI01000215
246700
Verrucomicrobiota
TTC
Glu
>WENV181882500
OGXI01000001
345141
Verrucomicrobiota
TTG
Gln
>WENV181882614
OGXI01000122
246701
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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