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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181924958
OGYM01000001
97755
Verrucomicrobiota
TAG
Leu
>WENV181924959
OGYM01000001
345110
Verrucomicrobiota
CCT
Arg
>WENV181924972
OGYM01000003
345115
Verrucomicrobiota
CAT
Met
>WENV181924973
OGYM01000003
368497
Verrucomicrobiota
GCC
Gly
>WENV181924974
OGYM01000003
246700
Verrucomicrobiota
TTC
Glu
>WENV181924975
OGYM01000004
119661
Verrucomicrobiota
CAA
Leu
>WENV181924978
OGYM01000006
155256
Verrucomicrobiota
TCT
Arg
>WENV181924981
OGYM01000008
414625
Verrucomicrobiota
CCC
Gly
>WENV181924982
OGYM01000008
345142
Verrucomicrobiota
CCG
Arg
>WENV181925012
OGYM01000045
246728
Verrucomicrobiota
GAA
Phe
>WENV181925013
OGYM01000045
154693
Verrucomicrobiota
TGG
Pro
>WENV181925014
OGYM01000045
155264
Verrucomicrobiota
GGG
Pro
>WENV181925016
OGYM01000048
60880
Verrucomicrobiota
CAG
Leu
>WENV181925019
OGYM01000057
345141
Verrucomicrobiota
TTG
Gln
>WENV181925030
OGYM01000075
344841
Verrucomicrobiota
CAC
Val
>WENV181925036
OGYM01000083
368497
Verrucomicrobiota
GCC
Gly
>WENV181925039
OGYM01000093
82056
Verrucomicrobiota
TAA
Leu
>WENV181925040
OGYM01000093
246260
Verrucomicrobiota
>WENV181925041
OGYM01000093
7256
Verrucomicrobiota
GCT
Ser
>WENV181925074
OGYM01000138
344845
Verrucomicrobiota
CTG
Gln
>WENV181925077
OGYM01000146
46246
Verrucomicrobiota
TGA
Ser
>WENV181925093
OGYM01000166
128202
Verrucomicrobiota
GTC
Asp
>WENV181925123
OGYM01000247
345119
Verrucomicrobiota
TAC
Val
>WENV181925137
OGYM01000283
345133
Verrucomicrobiota
GAC
Val
>WENV181925150
OGYM01000327
344844
Verrucomicrobiota
GCA
Cys
>WENV181925205
OGYM01000512
246701
Verrucomicrobiota
TTT
Lys
>WENV181925225
OGYM01000605
170105
Verrucomicrobiota
CAT
Met
>WENV181925325
OGYM01001172
82054
Verrucomicrobiota
GTA
Tyr
>WENV181925335
OGYM01001215
344839
Verrucomicrobiota
GTG
His
>WENV181925336
OGYM01001215
246709
Verrucomicrobiota
CAT
Met
>WENV181925356
OGYM01001343
344751
Verrucomicrobiota
GGT
Thr
>WENV181925357
OGYM01001343
287733
Verrucomicrobiota
CCA
Trp
>WENV181925380
OGYM01001466
7274
Verrucomicrobiota
CGA
Ser
>WENV181925381
OGYM01001469
344842
Verrucomicrobiota
CGT
Thr
>WENV181925382
OGYM01001469
246677
Verrucomicrobiota
CTT
Lys
>WENV181925396
OGYM01001627
345124
Verrucomicrobiota
GTT
Asn
>WENV181925412
OGYM01001758
345123
Verrucomicrobiota
TGT
Thr
>WENV181925607
OGYM01004141
246687
Verrucomicrobiota
CGC
Ala
>WENV181925968
OGYM01016616
155268
Verrucomicrobiota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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