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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182045595
OHDT01002175
204388
Verrucomicrobiota
CAT
Met
>WENV182045688
OHDT01006083
406043
Verrucomicrobiota
GCA
Cys
>WENV182045640
OHDT01003146
293125
Verrucomicrobiota
GAA
Phe
>WENV182045605
OHDT01002436
406350
Verrucomicrobiota
TGT
Thr
>WENV182045798
OHDT01018943
148006
Verrucomicrobiota
CAA
Leu
>WENV182045610
OHDT01002538
293105
Verrucomicrobiota
CAT
Met
>WENV182045639
OHDT01003125
405901
Verrucomicrobiota
GCC
Gly
>WENV182045717
OHDT01008283
483642
Verrucomicrobiota
CCC
Gly
>WENV182045482
OHDT01000714
8960
Verrucomicrobiota
CGA
Ser
>WENV182045565
OHDT01001546
101463
Verrucomicrobiota
TAA
Leu
>WENV182045664
OHDT01004090
157427
Verrucomicrobiota
GTC
Asp
>WENV182045606
OHDT01002498
293079
Verrucomicrobiota
CGC
Ala
>WENV182045604
OHDT01002433
120352
Verrucomicrobiota
TAG
Leu
>WENV182045566
OHDT01001546
292636
Verrucomicrobiota
>WENV182045718
OHDT01008283
489412
Verrucomicrobiota
TCC
Gly
>WENV182045689
OHDT01006083
298263
Verrucomicrobiota
TTC
Glu
>WENV182045538
OHDT01001183
293069
Verrucomicrobiota
CTT
Lys
>WENV182045584
OHDT01001904
406336
Verrucomicrobiota
CCT
Arg
>WENV182045643
OHDT01003180
406369
Verrucomicrobiota
CCG
Arg
>WENV182045587
OHDT01002016
405940
Verrucomicrobiota
GGT
Thr
>WENV182045621
OHDT01002686
406044
Verrucomicrobiota
CTG
Gln
>WENV182045650
OHDT01003304
187556
Verrucomicrobiota
GGG
Pro
>WENV182045609
OHDT01002538
406037
Verrucomicrobiota
GTG
His
>WENV182045585
OHDT01001960
406360
Verrucomicrobiota
GAC
Val
>WENV182045399
OHDT01000396
187548
Verrucomicrobiota
TCT
Arg
>WENV182045537
OHDT01001183
406040
Verrucomicrobiota
CGT
Thr
>WENV182045561
OHDT01001479
57652
Verrucomicrobiota
TGA
Ser
>WENV182045596
OHDT01002186
406039
Verrucomicrobiota
CAC
Val
>WENV182045560
OHDT01001477
75458
Verrucomicrobiota
CAG
Leu
>WENV182045702
OHDT01007292
406368
Verrucomicrobiota
TTG
Gln
>WENV182045495
OHDT01000812
21159
Verrucomicrobiota
GGA
Ser
>WENV182045631
OHDT01002900
101461
Verrucomicrobiota
GTA
Tyr
>WENV182045487
OHDT01000760
293095
Verrucomicrobiota
TTT
Lys
>WENV182045398
OHDT01000396
187561
Verrucomicrobiota
CGG
Pro
>WENV182045510
OHDT01000948
406342
Verrucomicrobiota
CAT
Met
>WENV182045581
OHDT01001867
406351
Verrucomicrobiota
GTT
Asn
>WENV182045580
OHDT01001848
303305
Verrucomicrobiota
GGC
Ala
>WENV182045674
OHDT01005070
406346
Verrucomicrobiota
TAC
Val
>WENV182045637
OHDT01003029
8938
Verrucomicrobiota
GCT
Ser
>WENV182045641
OHDT01003146
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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