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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182049100
OHEC01000002
119661
Verrucomicrobiota
CAA
Leu
>WENV182049098
OHEC01000001
155256
Verrucomicrobiota
TCT
Arg
>WENV182049097
OHEC01000001
246701
Verrucomicrobiota
TTT
Lys
>WENV182049106
OHEC01000003
345141
Verrucomicrobiota
TTG
Gln
>WENV182049108
OHEC01000003
345133
Verrucomicrobiota
GAC
Val
>WENV182049115
OHEC01000004
82054
Verrucomicrobiota
GTA
Tyr
>WENV182049176
OHEC01000047
246677
Verrucomicrobiota
CTT
Lys
>WENV182049485
OHEC01002515
344844
Verrucomicrobiota
GCA
Cys
>WENV182049361
OHEC01000805
155264
Verrucomicrobiota
GGG
Pro
>WENV182049107
OHEC01000003
344845
Verrucomicrobiota
CTG
Gln
>WENV182049113
OHEC01000004
128202
Verrucomicrobiota
GTC
Asp
>WENV182049110
OHEC01000003
128202
Verrucomicrobiota
GTC
Asp
>WENV182049305
OHEC01000410
414625
Verrucomicrobiota
CCC
Gly
>WENV182049162
OHEC01000030
46246
Verrucomicrobiota
TGA
Ser
>WENV182049101
OHEC01000002
97755
Verrucomicrobiota
TAG
Leu
>WENV182049225
OHEC01000129
246700
Verrucomicrobiota
TTC
Glu
>WENV182049224
OHEC01000129
246700
Verrucomicrobiota
TTC
Glu
>WENV182049240
OHEC01000163
246687
Verrucomicrobiota
CGC
Ala
>WENV182049304
OHEC01000410
419909
Verrucomicrobiota
TCC
Gly
>WENV182049134
OHEC01000009
344841
Verrucomicrobiota
CAC
Val
>WENV182049256
OHEC01000233
60880
Verrucomicrobiota
CAG
Leu
>WENV182049103
OHEC01000002
82056
Verrucomicrobiota
TAA
Leu
>WENV182049175
OHEC01000047
344842
Verrucomicrobiota
CGT
Thr
>WENV182049188
OHEC01000069
170105
Verrucomicrobiota
CAT
Met
>WENV182049179
OHEC01000048
287733
Verrucomicrobiota
CCA
Trp
>WENV182049112
OHEC01000003
345123
Verrucomicrobiota
TGT
Thr
>WENV182049102
OHEC01000002
345110
Verrucomicrobiota
CCT
Arg
>WENV182049402
OHEC01001302
344839
Verrucomicrobiota
GTG
His
>WENV182049180
OHEC01000049
7274
Verrucomicrobiota
CGA
Ser
>WENV182049104
OHEC01000002
246260
Verrucomicrobiota
>WENV182049177
OHEC01000047
155268
Verrucomicrobiota
CGG
Pro
>WENV182049171
OHEC01000042
82181
Verrucomicrobiota
AAG
Leu
>WENV182049222
OHEC01000127
246728
Verrucomicrobiota
GAA
Phe
>WENV182049105
OHEC01000002
7256
Verrucomicrobiota
GCT
Ser
>WENV182049161
OHEC01000030
345115
Verrucomicrobiota
CAT
Met
>WENV182049109
OHEC01000003
345119
Verrucomicrobiota
TAC
Val
>WENV182049114
OHEC01000004
345124
Verrucomicrobiota
GTT
Asn
>WENV182049116
OHEC01000004
17023
Verrucomicrobiota
GGA
Ser
>WENV182049287
OHEC01000366
368497
Verrucomicrobiota
GCC
Gly
>WENV182049163
OHEC01000030
368497
Verrucomicrobiota
GCC
Gly
>WENV182049169
OHEC01000040
345142
Verrucomicrobiota
CCG
Arg
>WENV182049403
OHEC01001302
246709
Verrucomicrobiota
CAT
Met
>WENV182049223
OHEC01000127
154693
Verrucomicrobiota
TGG
Pro
>WENV182049178
OHEC01000048
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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