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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182053305
OHEI01018314
406350
Verrucomicrobiota
TGT
Thr
>WENV182053264
OHEI01014653
148006
Verrucomicrobiota
CAA
Leu
>WENV182053291
OHEI01016745
405901
Verrucomicrobiota
GCC
Gly
>WENV182053361
OHEI01025357
229220
Verrucomicrobiota
CAT
Met
>WENV182053240
OHEI01012624
101463
Verrucomicrobiota
TAA
Leu
>WENV182053302
OHEI01017815
120352
Verrucomicrobiota
TAG
Leu
>WENV182053433
OHEI01034489
292636
Verrucomicrobiota
>WENV182053358
OHEI01024690
406336
Verrucomicrobiota
CCT
Arg
>WENV182053205
OHEI01010415
406369
Verrucomicrobiota
CCG
Arg
>WENV182053459
OHEI01038621
405940
Verrucomicrobiota
GGT
Thr
>WENV182053217
OHEI01011026
187548
Verrucomicrobiota
TCT
Arg
>WENV182053391
OHEI01029168
406040
Verrucomicrobiota
CGT
Thr
>WENV182053306
OHEI01018320
406039
Verrucomicrobiota
CAC
Val
>WENV182053481
OHEI01043892
406368
Verrucomicrobiota
TTG
Gln
>WENV182053500
OHEI01049801
187561
Verrucomicrobiota
CGG
Pro
>WENV182053422
OHEI01033210
406342
Verrucomicrobiota
CAT
Met
>WENV182053204
OHEI01010382
406351
Verrucomicrobiota
GTT
Asn
>WENV182053350
OHEI01023609
406346
Verrucomicrobiota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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