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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182068192
OHFG01000004
155264
Verrucomicrobiota
GGG
Pro
>WENV182068193
OHFG01000004
414625
Verrucomicrobiota
CCC
Gly
>WENV182068191
OHFG01000004
97755
Verrucomicrobiota
TAG
Leu
>WENV182068195
OHFG01000004
419909
Verrucomicrobiota
TCC
Gly
>WENV182068196
OHFG01000004
246728
Verrucomicrobiota
GAA
Phe
>WENV182068197
OHFG01000004
154693
Verrucomicrobiota
TGG
Pro
>WENV182068198
OHFG01000005
345133
Verrucomicrobiota
GAC
Val
>WENV182068199
OHFG01000005
46246
Verrucomicrobiota
TGA
Ser
>WENV182068248
OHFG01000025
246700
Verrucomicrobiota
TTC
Glu
>WENV182068250
OHFG01000025
246709
Verrucomicrobiota
CAT
Met
>WENV182068264
OHFG01000032
344845
Verrucomicrobiota
CTG
Gln
>WENV182068274
OHFG01000041
119661
Verrucomicrobiota
CAA
Leu
>WENV182068273
OHFG01000041
368497
Verrucomicrobiota
GCC
Gly
>WENV182068277
OHFG01000044
345142
Verrucomicrobiota
CCG
Arg
>WENV182068278
OHFG01000045
170105
Verrucomicrobiota
CAT
Met
>WENV182068280
OHFG01000051
344751
Verrucomicrobiota
GGT
Thr
>WENV182068283
OHFG01000053
246701
Verrucomicrobiota
TTT
Lys
>WENV182068285
OHFG01000057
82054
Verrucomicrobiota
GTA
Tyr
>WENV182068284
OHFG01000057
345124
Verrucomicrobiota
GTT
Asn
>WENV182068310
OHFG01000071
345110
Verrucomicrobiota
CCT
Arg
>WENV182068314
OHFG01000077
344841
Verrucomicrobiota
CAC
Val
>WENV182068347
OHFG01000107
246687
Verrucomicrobiota
CGC
Ala
>WENV182068418
OHFG01000187
345141
Verrucomicrobiota
TTG
Gln
>WENV182068416
OHFG01000187
128202
Verrucomicrobiota
GTC
Asp
>WENV182068420
OHFG01000190
345115
Verrucomicrobiota
CAT
Met
>WENV182068431
OHFG01000207
155256
Verrucomicrobiota
TCT
Arg
>WENV182068506
OHFG01000381
128202
Verrucomicrobiota
GTC
Asp
>WENV182068509
OHFG01000396
82056
Verrucomicrobiota
TAA
Leu
>WENV182068508
OHFG01000396
368497
Verrucomicrobiota
GCC
Gly
>WENV182068534
OHFG01000462
7256
Verrucomicrobiota
GCT
Ser
>WENV182068560
OHFG01000528
246677
Verrucomicrobiota
CTT
Lys
>WENV182068559
OHFG01000528
246677
Verrucomicrobiota
CTT
Lys
>WENV182068558
OHFG01000528
344842
Verrucomicrobiota
CGT
Thr
>WENV182068575
OHFG01000608
155268
Verrucomicrobiota
CGG
Pro
>WENV182068613
OHFG01000852
344844
Verrucomicrobiota
GCA
Cys
>WENV182068614
OHFG01000852
246700
Verrucomicrobiota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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