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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182105453
OHIC01001658
119661
Verrucomicrobiota
CAA
Leu
>WENV182105454
OHIC01001714
155256
Verrucomicrobiota
TCT
Arg
>WENV182105414
OHIC01001230
246701
Verrucomicrobiota
TTT
Lys
>WENV182105522
OHIC01002973
345141
Verrucomicrobiota
TTG
Gln
>WENV182105456
OHIC01001760
345133
Verrucomicrobiota
GAC
Val
>WENV182105361
OHIC01000889
82054
Verrucomicrobiota
GTA
Tyr
>WENV182105509
OHIC01002499
246677
Verrucomicrobiota
CTT
Lys
>WENV182105578
OHIC01005531
344844
Verrucomicrobiota
GCA
Cys
>WENV182105389
OHIC01001073
155264
Verrucomicrobiota
GGG
Pro
>WENV182105526
OHIC01003198
344845
Verrucomicrobiota
CTG
Gln
>WENV182105423
OHIC01001263
128202
Verrucomicrobiota
GTC
Asp
>WENV182105469
OHIC01001863
414625
Verrucomicrobiota
CCC
Gly
>WENV182105564
OHIC01004997
46246
Verrucomicrobiota
TGA
Ser
>WENV182105448
OHIC01001613
97755
Verrucomicrobiota
TAG
Leu
>WENV182105579
OHIC01005531
246700
Verrucomicrobiota
TTC
Glu
>WENV182105518
OHIC01002741
246687
Verrucomicrobiota
CGC
Ala
>WENV182105468
OHIC01001863
419909
Verrucomicrobiota
TCC
Gly
>WENV182105440
OHIC01001469
344841
Verrucomicrobiota
CAC
Val
>WENV182105514
OHIC01002632
60880
Verrucomicrobiota
CAG
Leu
>WENV182105340
OHIC01000767
82056
Verrucomicrobiota
TAA
Leu
>WENV182105508
OHIC01002499
344842
Verrucomicrobiota
CGT
Thr
>WENV182105617
OHIC01007605
170105
Verrucomicrobiota
CAT
Met
>WENV182105517
OHIC01002684
287733
Verrucomicrobiota
CCA
Trp
>WENV182105413
OHIC01001228
345123
Verrucomicrobiota
TGT
Thr
>WENV182105525
OHIC01003140
345110
Verrucomicrobiota
CCT
Arg
>WENV182105335
OHIC01000759
7274
Verrucomicrobiota
CGA
Ser
>WENV182105341
OHIC01000767
246260
Verrucomicrobiota
>WENV182105276
OHIC01000464
155268
Verrucomicrobiota
CGG
Pro
>WENV182105488
OHIC01002101
246728
Verrucomicrobiota
GAA
Phe
>WENV182105342
OHIC01000767
7256
Verrucomicrobiota
GCT
Ser
>WENV182105434
OHIC01001408
345115
Verrucomicrobiota
CAT
Met
>WENV182105455
OHIC01001733
345119
Verrucomicrobiota
TAC
Val
>WENV182105358
OHIC01000871
345124
Verrucomicrobiota
GTT
Asn
>WENV182105279
OHIC01000493
17023
Verrucomicrobiota
GGA
Ser
>WENV182105503
OHIC01002329
368497
Verrucomicrobiota
GCC
Gly
>WENV182105645
OHIC01010563
246709
Verrucomicrobiota
CAT
Met
>WENV182105489
OHIC01002101
154693
Verrucomicrobiota
TGG
Pro
>WENV182105382
OHIC01001030
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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