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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182212384
OHQG01000403
292636
Verrucomicrobiota
>WENV182212486
OHQG01000815
101600
Verrucomicrobiota
AAG
Leu
>WENV182212571
OHQG01001670
148006
Verrucomicrobiota
CAA
Leu
>WENV182212545
OHQG01001423
406039
Verrucomicrobiota
CAC
Val
>WENV182212574
OHQG01001703
75458
Verrucomicrobiota
CAG
Leu
>WENV182212597
OHQG01001995
293105
Verrucomicrobiota
CAT
Met
>WENV182212485
OHQG01000808
229220
Verrucomicrobiota
CAT
Met
>WENV182212503
OHQG01001010
406342
Verrucomicrobiota
CAT
Met
>WENV182212415
OHQG01000464
483642
Verrucomicrobiota
CCC
Gly
>WENV182212450
OHQG01000622
406369
Verrucomicrobiota
CCG
Arg
>WENV182212402
OHQG01000437
406336
Verrucomicrobiota
CCT
Arg
>WENV182212477
OHQG01000750
8960
Verrucomicrobiota
CGA
Ser
>WENV182212425
OHQG01000503
293079
Verrucomicrobiota
CGC
Ala
>WENV182212562
OHQG01001573
187561
Verrucomicrobiota
CGG
Pro
>WENV182212680
OHQG01003645
406044
Verrucomicrobiota
CTG
Gln
>WENV182213015
OHQG01030697
293069
Verrucomicrobiota
CTT
Lys
>WENV182212471
OHQG01000722
293125
Verrucomicrobiota
GAA
Phe
>WENV182212658
OHQG01003001
406360
Verrucomicrobiota
GAC
Val
>WENV182212837
OHQG01010127
406043
Verrucomicrobiota
GCA
Cys
>WENV182212289
OHQG01000076
405901
Verrucomicrobiota
GCC
Gly
>WENV182212838
OHQG01010253
405901
Verrucomicrobiota
GCC
Gly
>WENV182212385
OHQG01000403
8938
Verrucomicrobiota
GCT
Ser
>WENV182212441
OHQG01000559
21159
Verrucomicrobiota
GGA
Ser
>WENV182212590
OHQG01001907
303305
Verrucomicrobiota
GGC
Ala
>WENV182212489
OHQG01000846
187556
Verrucomicrobiota
GGG
Pro
>WENV182212476
OHQG01000748
405940
Verrucomicrobiota
GGT
Thr
>WENV182212430
OHQG01000540
101461
Verrucomicrobiota
GTA
Tyr
>WENV182212648
OHQG01002825
157427
Verrucomicrobiota
GTC
Asp
>WENV182212596
OHQG01001995
406037
Verrucomicrobiota
GTG
His
>WENV182212622
OHQG01002396
406351
Verrucomicrobiota
GTT
Asn
>WENV182212383
OHQG01000403
101463
Verrucomicrobiota
TAA
Leu
>WENV182212478
OHQG01000753
406346
Verrucomicrobiota
TAC
Val
>WENV182212346
OHQG01000229
120352
Verrucomicrobiota
TAG
Leu
>WENV182212414
OHQG01000464
507474
Verrucomicrobiota
TCC
Gly
>WENV182212493
OHQG01000878
187548
Verrucomicrobiota
TCT
Arg
>WENV182212480
OHQG01000763
57652
Verrucomicrobiota
TGA
Ser
>WENV182212472
OHQG01000722
186928
Verrucomicrobiota
TGG
Pro
>WENV182212473
OHQG01000733
406350
Verrucomicrobiota
TGT
Thr
>WENV182212854
OHQG01010972
298263
Verrucomicrobiota
TTC
Glu
>WENV182212591
OHQG01001907
406368
Verrucomicrobiota
TTG
Gln
>WENV182212528
OHQG01001209
293095
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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