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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182232165
OHRN01003052
406350
Verrucomicrobiota
TGT
Thr
>WENV182232243
OHRN01007334
148006
Verrucomicrobiota
CAA
Leu
>WENV182232191
OHRN01003979
405901
Verrucomicrobiota
GCC
Gly
>WENV182232279
OHRN01010846
157427
Verrucomicrobiota
GTC
Asp
>WENV182232292
OHRN01014602
293079
Verrucomicrobiota
CGC
Ala
>WENV182232238
OHRN01006982
120352
Verrucomicrobiota
TAG
Leu
>WENV182232289
OHRN01014052
406369
Verrucomicrobiota
CCG
Arg
>WENV182232305
OHRN01018036
405940
Verrucomicrobiota
GGT
Thr
>WENV182232216
OHRN01005722
406044
Verrucomicrobiota
CTG
Gln
>WENV182232227
OHRN01006687
406037
Verrucomicrobiota
GTG
His
>WENV182232271
OHRN01009487
406368
Verrucomicrobiota
TTG
Gln
>WENV182232257
OHRN01008207
187561
Verrucomicrobiota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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