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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182312167
OHXV01000024
246701
Verrucomicrobiota
TTT
Lys
>WENV182312170
OHXV01000312
246687
Verrucomicrobiota
CGC
Ala
>WENV182312171
OHXV01000338
345123
Verrucomicrobiota
TGT
Thr
>WENV182312180
OHXV01000549
345142
Verrucomicrobiota
CCG
Arg
>WENV182312182
OHXV01000594
414625
Verrucomicrobiota
CCC
Gly
>WENV182312183
OHXV01000606
344845
Verrucomicrobiota
CTG
Gln
>WENV182312185
OHXV01001064
344839
Verrucomicrobiota
GTG
His
>WENV182312187
OHXV01001076
345110
Verrucomicrobiota
CCT
Arg
>WENV182312188
OHXV01001302
128202
Verrucomicrobiota
GTC
Asp
>WENV182312194
OHXV01002028
246700
Verrucomicrobiota
TTC
Glu
>WENV182312196
OHXV01002499
46246
Verrucomicrobiota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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