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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182317480
OHYE01012028
406043
Verrucomicrobiota
GCA
Cys
>WENV182317503
OHYE01013684
293125
Verrucomicrobiota
GAA
Phe
>WENV182317164
OHYE01001125
406350
Verrucomicrobiota
TGT
Thr
>WENV182317240
OHYE01002346
148006
Verrucomicrobiota
CAA
Leu
>WENV182317398
OHYE01007051
101600
Verrucomicrobiota
AAG
Leu
>WENV182317521
OHYE01015403
293105
Verrucomicrobiota
CAT
Met
>WENV182317533
OHYE01016274
405901
Verrucomicrobiota
GCC
Gly
>WENV182317581
OHYE01021620
483642
Verrucomicrobiota
CCC
Gly
>WENV182317384
OHYE01006416
8960
Verrucomicrobiota
CGA
Ser
>WENV182317396
OHYE01007018
101463
Verrucomicrobiota
TAA
Leu
>WENV182317610
OHYE01025580
157427
Verrucomicrobiota
GTC
Asp
>WENV182317679
OHYE01039837
120352
Verrucomicrobiota
TAG
Leu
>WENV182317397
OHYE01007018
292636
Verrucomicrobiota
>WENV182317297
OHYE01003485
406369
Verrucomicrobiota
CCG
Arg
>WENV182317341
OHYE01004751
405940
Verrucomicrobiota
GGT
Thr
>WENV182317256
OHYE01002632
406044
Verrucomicrobiota
CTG
Gln
>WENV182317630
OHYE01028887
187556
Verrucomicrobiota
GGG
Pro
>WENV182317454
OHYE01010263
406037
Verrucomicrobiota
GTG
His
>WENV182317429
OHYE01008701
406360
Verrucomicrobiota
GAC
Val
>WENV182317302
OHYE01003614
187548
Verrucomicrobiota
TCT
Arg
>WENV182317458
OHYE01010437
57652
Verrucomicrobiota
TGA
Ser
>WENV182317406
OHYE01007447
406039
Verrucomicrobiota
CAC
Val
>WENV182317752
OHYE01060977
406368
Verrucomicrobiota
TTG
Gln
>WENV182317239
OHYE01002334
21159
Verrucomicrobiota
GGA
Ser
>WENV182317385
OHYE01006516
101461
Verrucomicrobiota
GTA
Tyr
>WENV182317556
OHYE01018844
187561
Verrucomicrobiota
CGG
Pro
>WENV182317532
OHYE01016102
406342
Verrucomicrobiota
CAT
Met
>WENV182317380
OHYE01006225
406351
Verrucomicrobiota
GTT
Asn
>WENV182317363
OHYE01005426
8938
Verrucomicrobiota
GCT
Ser
>WENV182317504
OHYE01013684
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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