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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182389753
OIED01003301
82181
Verrucomicrobiota
AAG
Leu
>WENV182389993
OIED01012869
60880
Verrucomicrobiota
CAG
Leu
>WENV182389782
OIED01004075
170105
Verrucomicrobiota
CAT
Met
>WENV182389932
OIED01008542
246709
Verrucomicrobiota
CAT
Met
>WENV182390144
OIED01027758
414625
Verrucomicrobiota
CCC
Gly
>WENV182390247
OIED01051667
155268
Verrucomicrobiota
CGG
Pro
>WENV182389931
OIED01008539
344845
Verrucomicrobiota
CTG
Gln
>WENV182389904
OIED01007479
345133
Verrucomicrobiota
GAC
Val
>WENV182389751
OIED01003215
347038
Verrucomicrobiota
GCC
Gly
>WENV182389996
OIED01013070
7256
Verrucomicrobiota
GCT
Ser
>WENV182390105
OIED01022997
17023
Verrucomicrobiota
GGA
Ser
>WENV182389923
OIED01008319
128202
Verrucomicrobiota
GTC
Asp
>WENV182389852
OIED01005851
344839
Verrucomicrobiota
GTG
His
>WENV182389799
OIED01004356
345119
Verrucomicrobiota
TAC
Val
>WENV182390143
OIED01027758
419909
Verrucomicrobiota
TCC
Gly
>WENV182389827
OIED01005289
246700
Verrucomicrobiota
TTC
Glu
>WENV182389966
OIED01010548
345141
Verrucomicrobiota
TTG
Gln
>WENV182389975
OIED01011751
246701
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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