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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182622751
OJKK01001150
229220
Verrucomicrobiota
CAT
Met
>WENV182622824
OJKK01002190
406043
Verrucomicrobiota
GCA
Cys
>WENV182622825
OJKK01002190
298263
Verrucomicrobiota
TTC
Glu
>WENV182622840
OJKK01002592
406360
Verrucomicrobiota
GAC
Val
>WENV182622852
OJKK01002858
21159
Verrucomicrobiota
GGA
Ser
>WENV182622859
OJKK01003017
406044
Verrucomicrobiota
CTG
Gln
>WENV182622864
OJKK01003230
406336
Verrucomicrobiota
CCT
Arg
>WENV182622873
OJKK01003560
406350
Verrucomicrobiota
TGT
Thr
>WENV182622886
OJKK01004112
75458
Verrucomicrobiota
CAG
Leu
>WENV182622890
OJKK01004343
157427
Verrucomicrobiota
GTC
Asp
>WENV182622895
OJKK01004429
405901
Verrucomicrobiota
GCC
Gly
>WENV182622896
OJKK01004432
187548
Verrucomicrobiota
TCT
Arg
>WENV182622916
OJKK01005221
406369
Verrucomicrobiota
CCG
Arg
>WENV182622922
OJKK01005418
187561
Verrucomicrobiota
CGG
Pro
>WENV182622924
OJKK01005476
8938
Verrucomicrobiota
GCT
Ser
>WENV182622927
OJKK01005666
406040
Verrucomicrobiota
CGT
Thr
>WENV182622928
OJKK01005666
293069
Verrucomicrobiota
CTT
Lys
>WENV182622930
OJKK01005852
148006
Verrucomicrobiota
CAA
Leu
>WENV182622940
OJKK01006218
8960
Verrucomicrobiota
CGA
Ser
>WENV182622943
OJKK01006498
406037
Verrucomicrobiota
GTG
His
>WENV182622995
OJKK01008815
101600
Verrucomicrobiota
AAG
Leu
>WENV182622999
OJKK01009292
406346
Verrucomicrobiota
TAC
Val
>WENV182623013
OJKK01010601
405940
Verrucomicrobiota
GGT
Thr
>WENV182623014
OJKK01010650
293095
Verrucomicrobiota
TTT
Lys
>WENV182623022
OJKK01010981
293079
Verrucomicrobiota
CGC
Ala
>WENV182623078
OJKK01015335
303305
Verrucomicrobiota
GGC
Ala
>WENV182623082
OJKK01015473
507474
Verrucomicrobiota
TCC
Gly
>WENV182623083
OJKK01015473
483642
Verrucomicrobiota
CCC
Gly
>WENV182623086
OJKK01015546
293105
Verrucomicrobiota
CAT
Met
>WENV182623112
OJKK01017233
101463
Verrucomicrobiota
TAA
Leu
>WENV182623117
OJKK01017786
101461
Verrucomicrobiota
GTA
Tyr
>WENV182623127
OJKK01019201
406342
Verrucomicrobiota
CAT
Met
>WENV182623187
OJKK01027185
187556
Verrucomicrobiota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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