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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182732721
OJQB01013636
229220
Verrucomicrobiota
CAT
Met
>WENV182732838
OJQB01038875
292636
Verrucomicrobiota
>WENV182732845
OJQB01040398
489412
Verrucomicrobiota
TCC
Gly
>WENV182732826
OJQB01036232
405940
Verrucomicrobiota
GGT
Thr
>WENV182732686
OJQB01010349
187556
Verrucomicrobiota
GGG
Pro
>WENV182732820
OJQB01034841
406037
Verrucomicrobiota
GTG
His
>WENV182732775
OJQB01025175
57652
Verrucomicrobiota
TGA
Ser
>WENV182732812
OJQB01032898
75458
Verrucomicrobiota
CAG
Leu
>WENV182732785
OJQB01026631
101461
Verrucomicrobiota
GTA
Tyr
>WENV182732711
OJQB01012089
293095
Verrucomicrobiota
TTT
Lys
>WENV182732794
OJQB01029272
187561
Verrucomicrobiota
CGG
Pro
>WENV182732750
OJQB01018698
406351
Verrucomicrobiota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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