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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182935583
OKVA01000053
246260
Verrucomicrobiota
>WENV182935636
OKVA01000210
82181
Verrucomicrobiota
AAG
Leu
>WENV182935629
OKVA01000196
119661
Verrucomicrobiota
CAA
Leu
>WENV182935609
OKVA01000115
344841
Verrucomicrobiota
CAC
Val
>WENV182935653
OKVA01000263
60880
Verrucomicrobiota
CAG
Leu
>WENV182935607
OKVA01000098
170105
Verrucomicrobiota
CAT
Met
>WENV182935624
OKVA01000166
345115
Verrucomicrobiota
CAT
Met
>WENV182935784
OKVA01001482
246709
Verrucomicrobiota
CAT
Met
>WENV182935633
OKVA01000201
414625
Verrucomicrobiota
CCC
Gly
>WENV182935693
OKVA01000528
345142
Verrucomicrobiota
CCG
Arg
>WENV182935553
OKVA01000015
345110
Verrucomicrobiota
CCT
Arg
>WENV182935596
OKVA01000073
7274
Verrucomicrobiota
CGA
Ser
>WENV182935600
OKVA01000080
246687
Verrucomicrobiota
CGC
Ala
>WENV182935570
OKVA01000031
155268
Verrucomicrobiota
CGG
Pro
>WENV182935571
OKVA01000031
344842
Verrucomicrobiota
CGT
Thr
>WENV182935617
OKVA01000126
344845
Verrucomicrobiota
CTG
Gln
>WENV182935572
OKVA01000031
246677
Verrucomicrobiota
CTT
Lys
>WENV182935630
OKVA01000200
246728
Verrucomicrobiota
GAA
Phe
>WENV182935601
OKVA01000089
345133
Verrucomicrobiota
GAC
Val
>WENV182935688
OKVA01000484
344844
Verrucomicrobiota
GCA
Cys
>WENV182935715
OKVA01000667
347038
Verrucomicrobiota
GCC
Gly
>WENV182935612
OKVA01000122
347038
Verrucomicrobiota
GCC
Gly
>WENV182935584
OKVA01000053
7256
Verrucomicrobiota
GCT
Ser
>WENV182935573
OKVA01000032
17023
Verrucomicrobiota
GGA
Ser
>WENV182935691
OKVA01000488
155264
Verrucomicrobiota
GGG
Pro
>WENV182935554
OKVA01000016
344751
Verrucomicrobiota
GGT
Thr
>WENV182935547
OKVA01000007
82054
Verrucomicrobiota
GTA
Tyr
>WENV182935616
OKVA01000126
128202
Verrucomicrobiota
GTC
Asp
>WENV182935783
OKVA01001482
344839
Verrucomicrobiota
GTG
His
>WENV182935546
OKVA01000007
345124
Verrucomicrobiota
GTT
Asn
>WENV182935582
OKVA01000053
82056
Verrucomicrobiota
TAA
Leu
>WENV182935602
OKVA01000089
345119
Verrucomicrobiota
TAC
Val
>WENV182935593
OKVA01000064
97755
Verrucomicrobiota
TAG
Leu
>WENV182935632
OKVA01000201
419909
Verrucomicrobiota
TCC
Gly
>WENV182935618
OKVA01000130
155256
Verrucomicrobiota
TCT
Arg
>WENV182935673
OKVA01000383
46246
Verrucomicrobiota
TGA
Ser
>WENV182935631
OKVA01000200
154693
Verrucomicrobiota
TGG
Pro
>WENV182935559
OKVA01000025
345123
Verrucomicrobiota
TGT
Thr
>WENV182935689
OKVA01000484
246700
Verrucomicrobiota
TTC
Glu
>WENV182935613
OKVA01000122
246700
Verrucomicrobiota
TTC
Glu
>WENV182935676
OKVA01000401
345141
Verrucomicrobiota
TTG
Gln
>WENV182935575
OKVA01000035
246701
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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