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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183100374
OLNG01000003
119661
Verrucomicrobiota
CAA
Leu
>WENV183100376
OLNG01000004
155256
Verrucomicrobiota
TCT
Arg
>WENV183100528
OLNG01000081
246701
Verrucomicrobiota
TTT
Lys
>WENV183100397
OLNG01000010
345141
Verrucomicrobiota
TTG
Gln
>WENV183100935
OLNG01000999
345133
Verrucomicrobiota
GAC
Val
>WENV183100456
OLNG01000029
82054
Verrucomicrobiota
GTA
Tyr
>WENV183100606
OLNG01000128
246677
Verrucomicrobiota
CTT
Lys
>WENV183100605
OLNG01000128
246677
Verrucomicrobiota
CTT
Lys
>WENV183100432
OLNG01000018
344844
Verrucomicrobiota
GCA
Cys
>WENV183100622
OLNG01000155
155264
Verrucomicrobiota
GGG
Pro
>WENV183100398
OLNG01000010
344845
Verrucomicrobiota
CTG
Gln
>WENV183100487
OLNG01000052
128202
Verrucomicrobiota
GTC
Asp
>WENV183100467
OLNG01000036
414625
Verrucomicrobiota
CCC
Gly
>WENV183100849
OLNG01000628
46246
Verrucomicrobiota
TGA
Ser
>WENV183100375
OLNG01000003
97755
Verrucomicrobiota
TAG
Leu
>WENV183100433
OLNG01000018
246700
Verrucomicrobiota
TTC
Glu
>WENV183100428
OLNG01000018
246700
Verrucomicrobiota
TTC
Glu
>WENV183100737
OLNG01000314
347038
Verrucomicrobiota
GCC
Gly
>WENV183100427
OLNG01000018
347038
Verrucomicrobiota
GCC
Gly
>WENV183100693
OLNG01000236
246687
Verrucomicrobiota
CGC
Ala
>WENV183100400
OLNG01000010
344841
Verrucomicrobiota
CAC
Val
>WENV183100878
OLNG01000759
60880
Verrucomicrobiota
CAG
Leu
>WENV183100370
OLNG01000003
82056
Verrucomicrobiota
TAA
Leu
>WENV183100604
OLNG01000128
344842
Verrucomicrobiota
CGT
Thr
>WENV183100434
OLNG01000018
345123
Verrucomicrobiota
TGT
Thr
>WENV183100369
OLNG01000003
345110
Verrucomicrobiota
CCT
Arg
>WENV183100429
OLNG01000018
344839
Verrucomicrobiota
GTG
His
>WENV183100874
OLNG01000733
7274
Verrucomicrobiota
CGA
Ser
>WENV183100371
OLNG01000003
246260
Verrucomicrobiota
>WENV183100941
OLNG01001048
155268
Verrucomicrobiota
CGG
Pro
>WENV183100431
OLNG01000018
82181
Verrucomicrobiota
AAG
Leu
>WENV183100470
OLNG01000036
246728
Verrucomicrobiota
GAA
Phe
>WENV183100372
OLNG01000003
7256
Verrucomicrobiota
GCT
Ser
>WENV183100435
OLNG01000018
345115
Verrucomicrobiota
CAT
Met
>WENV183100503
OLNG01000059
345119
Verrucomicrobiota
TAC
Val
>WENV183100455
OLNG01000029
345124
Verrucomicrobiota
GTT
Asn
>WENV183100488
OLNG01000052
17023
Verrucomicrobiota
GGA
Ser
>WENV183100468
OLNG01000036
345142
Verrucomicrobiota
CCG
Arg
>WENV183100430
OLNG01000018
246709
Verrucomicrobiota
CAT
Met
>WENV183100471
OLNG01000036
154693
Verrucomicrobiota
TGG
Pro
>WENV183100507
OLNG01000062
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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