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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183190109
OLPR01000015
119661
Verrucomicrobiota
CAA
Leu
>WENV183190213
OLPR01000066
155256
Verrucomicrobiota
TCT
Arg
>WENV183190115
OLPR01000017
246701
Verrucomicrobiota
TTT
Lys
>WENV183190100
OLPR01000013
345141
Verrucomicrobiota
TTG
Gln
>WENV183190182
OLPR01000045
345133
Verrucomicrobiota
GAC
Val
>WENV183190166
OLPR01000037
82054
Verrucomicrobiota
GTA
Tyr
>WENV183190227
OLPR01000079
246677
Verrucomicrobiota
CTT
Lys
>WENV183190226
OLPR01000079
246677
Verrucomicrobiota
CTT
Lys
>WENV183190104
OLPR01000014
344844
Verrucomicrobiota
GCA
Cys
>WENV183190366
OLPR01000216
155264
Verrucomicrobiota
GGG
Pro
>WENV183190342
OLPR01000182
344845
Verrucomicrobiota
CTG
Gln
>WENV183190506
OLPR01000529
128202
Verrucomicrobiota
GTC
Asp
>WENV183190341
OLPR01000182
128202
Verrucomicrobiota
GTC
Asp
>WENV183190210
OLPR01000065
414625
Verrucomicrobiota
CCC
Gly
>WENV183190527
OLPR01000576
46246
Verrucomicrobiota
TGA
Ser
>WENV183190452
OLPR01000360
97755
Verrucomicrobiota
TAG
Leu
>WENV183190278
OLPR01000120
246700
Verrucomicrobiota
TTC
Glu
>WENV183190105
OLPR01000014
246700
Verrucomicrobiota
TTC
Glu
>WENV183190424
OLPR01000300
347038
Verrucomicrobiota
GCC
Gly
>WENV183190277
OLPR01000120
347038
Verrucomicrobiota
GCC
Gly
>WENV183190107
OLPR01000014
246687
Verrucomicrobiota
CGC
Ala
>WENV183190212
OLPR01000065
419909
Verrucomicrobiota
TCC
Gly
>WENV183190099
OLPR01000013
344841
Verrucomicrobiota
CAC
Val
>WENV183190215
OLPR01000069
60880
Verrucomicrobiota
CAG
Leu
>WENV183190111
OLPR01000015
82056
Verrucomicrobiota
TAA
Leu
>WENV183190225
OLPR01000079
344842
Verrucomicrobiota
CGT
Thr
>WENV183190491
OLPR01000471
170105
Verrucomicrobiota
CAT
Met
>WENV183190106
OLPR01000014
345123
Verrucomicrobiota
TGT
Thr
>WENV183190110
OLPR01000015
345110
Verrucomicrobiota
CCT
Arg
>WENV183190101
OLPR01000014
344839
Verrucomicrobiota
GTG
His
>WENV183190249
OLPR01000094
7274
Verrucomicrobiota
CGA
Ser
>WENV183190112
OLPR01000015
246260
Verrucomicrobiota
>WENV183190228
OLPR01000079
155268
Verrucomicrobiota
CGG
Pro
>WENV183190103
OLPR01000014
82181
Verrucomicrobiota
AAG
Leu
>WENV183190364
OLPR01000216
246728
Verrucomicrobiota
GAA
Phe
>WENV183190113
OLPR01000015
7256
Verrucomicrobiota
GCT
Ser
>WENV183190276
OLPR01000120
345115
Verrucomicrobiota
CAT
Met
>WENV183190181
OLPR01000045
345119
Verrucomicrobiota
TAC
Val
>WENV183190165
OLPR01000037
345124
Verrucomicrobiota
GTT
Asn
>WENV183190204
OLPR01000060
17023
Verrucomicrobiota
GGA
Ser
>WENV183190211
OLPR01000065
345142
Verrucomicrobiota
CCG
Arg
>WENV183190102
OLPR01000014
246709
Verrucomicrobiota
CAT
Met
>WENV183190365
OLPR01000216
154693
Verrucomicrobiota
TGG
Pro
>WENV183190705
OLPR01001424
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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