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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183391214
OLZD01000068
17023
Verrucomicrobiota
GGA
Ser
>WENV183391231
OLZD01000137
82054
Verrucomicrobiota
GTA
Tyr
>WENV183391256
OLZD01000315
155256
Verrucomicrobiota
TCT
Arg
>WENV183391257
OLZD01000316
287733
Verrucomicrobiota
CCA
Trp
>WENV183391271
OLZD01000406
414625
Verrucomicrobiota
CCC
Gly
>WENV183391272
OLZD01000406
419909
Verrucomicrobiota
TCC
Gly
>WENV183391274
OLZD01000416
344841
Verrucomicrobiota
CAC
Val
>WENV183391277
OLZD01000424
82056
Verrucomicrobiota
TAA
Leu
>WENV183391278
OLZD01000424
246260
Verrucomicrobiota
>WENV183391279
OLZD01000424
7256
Verrucomicrobiota
GCT
Ser
>WENV183391284
OLZD01000466
344842
Verrucomicrobiota
CGT
Thr
>WENV183391285
OLZD01000466
246677
Verrucomicrobiota
CTT
Lys
>WENV183391306
OLZD01000570
60880
Verrucomicrobiota
CAG
Leu
>WENV183391307
OLZD01000595
155268
Verrucomicrobiota
CGG
Pro
>WENV183391308
OLZD01000602
7274
Verrucomicrobiota
CGA
Ser
>WENV183391316
OLZD01000671
345124
Verrucomicrobiota
GTT
Asn
>WENV183391317
OLZD01000673
345141
Verrucomicrobiota
TTG
Gln
>WENV183391318
OLZD01000675
97755
Verrucomicrobiota
TAG
Leu
>WENV183391320
OLZD01000732
246700
Verrucomicrobiota
TTC
Glu
>WENV183391324
OLZD01000756
368497
Verrucomicrobiota
GCC
Gly
>WENV183391327
OLZD01000830
246728
Verrucomicrobiota
GAA
Phe
>WENV183391328
OLZD01000830
154693
Verrucomicrobiota
TGG
Pro
>WENV183391329
OLZD01000848
345133
Verrucomicrobiota
GAC
Val
>WENV183391333
OLZD01000878
82181
Verrucomicrobiota
AAG
Leu
>WENV183391348
OLZD01001131
344839
Verrucomicrobiota
GTG
His
>WENV183391349
OLZD01001131
246709
Verrucomicrobiota
CAT
Met
>WENV183391352
OLZD01001167
246687
Verrucomicrobiota
CGC
Ala
>WENV183391355
OLZD01001235
246701
Verrucomicrobiota
TTT
Lys
>WENV183391400
OLZD01001748
345119
Verrucomicrobiota
TAC
Val
>WENV183391420
OLZD01002131
119661
Verrucomicrobiota
CAA
Leu
>WENV183391426
OLZD01002231
345115
Verrucomicrobiota
CAT
Met
>WENV183391467
OLZD01003192
155264
Verrucomicrobiota
GGG
Pro
>WENV183391475
OLZD01003357
344845
Verrucomicrobiota
CTG
Gln
>WENV183391480
OLZD01003436
344751
Verrucomicrobiota
GGT
Thr
>WENV183391538
OLZD01004777
345142
Verrucomicrobiota
CCG
Arg
>WENV183391557
OLZD01005451
128202
Verrucomicrobiota
GTC
Asp
>WENV183391581
OLZD01006862
170105
Verrucomicrobiota
CAT
Met
>WENV183391598
OLZD01007638
345123
Verrucomicrobiota
TGT
Thr
>WENV183391631
OLZD01009603
345110
Verrucomicrobiota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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