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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183399188
OLZQ01000665
406043
Verrucomicrobiota
GCA
Cys
>WENV183399103
OLZQ01000426
293125
Verrucomicrobiota
GAA
Phe
>WENV183399299
OLZQ01001933
406350
Verrucomicrobiota
TGT
Thr
>WENV183399165
OLZQ01000589
148006
Verrucomicrobiota
CAA
Leu
>WENV183399053
OLZQ01000292
101600
Verrucomicrobiota
AAG
Leu
>WENV183399521
OLZQ01007961
293105
Verrucomicrobiota
CAT
Met
>WENV183399241
OLZQ01001146
405901
Verrucomicrobiota
GCC
Gly
>WENV183399373
OLZQ01003144
405901
Verrucomicrobiota
GCC
Gly
>WENV183399178
OLZQ01000628
483642
Verrucomicrobiota
CCC
Gly
>WENV183399202
OLZQ01000723
8960
Verrucomicrobiota
CGA
Ser
>WENV183399344
OLZQ01002516
101463
Verrucomicrobiota
TAA
Leu
>WENV183399235
OLZQ01001107
157427
Verrucomicrobiota
GTC
Asp
>WENV183399368
OLZQ01002885
293079
Verrucomicrobiota
CGC
Ala
>WENV183399155
OLZQ01000522
120352
Verrucomicrobiota
TAG
Leu
>WENV183399345
OLZQ01002516
292636
Verrucomicrobiota
>WENV183399009
OLZQ01000155
293069
Verrucomicrobiota
CTT
Lys
>WENV183399159
OLZQ01000543
406336
Verrucomicrobiota
CCT
Arg
>WENV183399223
OLZQ01000998
406369
Verrucomicrobiota
CCG
Arg
>WENV183399210
OLZQ01000855
405940
Verrucomicrobiota
GGT
Thr
>WENV183399503
OLZQ01007371
406044
Verrucomicrobiota
CTG
Gln
>WENV183399102
OLZQ01000426
187556
Verrucomicrobiota
GGG
Pro
>WENV183399539
OLZQ01009170
406037
Verrucomicrobiota
GTG
His
>WENV183399059
OLZQ01000312
406360
Verrucomicrobiota
GAC
Val
>WENV183399057
OLZQ01000302
187548
Verrucomicrobiota
TCT
Arg
>WENV183399008
OLZQ01000155
406040
Verrucomicrobiota
CGT
Thr
>WENV183399578
OLZQ01012371
57652
Verrucomicrobiota
TGA
Ser
>WENV183399204
OLZQ01000761
406039
Verrucomicrobiota
CAC
Val
>WENV183399156
OLZQ01000534
75458
Verrucomicrobiota
CAG
Leu
>WENV183399341
OLZQ01002481
406368
Verrucomicrobiota
TTG
Gln
>WENV183399185
OLZQ01000655
21159
Verrucomicrobiota
GGA
Ser
>WENV183399192
OLZQ01000683
101461
Verrucomicrobiota
GTA
Tyr
>WENV183399446
OLZQ01004683
293095
Verrucomicrobiota
TTT
Lys
>WENV183399007
OLZQ01000155
187561
Verrucomicrobiota
CGG
Pro
>WENV183399336
OLZQ01002405
406342
Verrucomicrobiota
CAT
Met
>WENV183399034
OLZQ01000214
406351
Verrucomicrobiota
GTT
Asn
>WENV183399060
OLZQ01000312
406346
Verrucomicrobiota
TAC
Val
>WENV183399312
OLZQ01002122
8938
Verrucomicrobiota
GCT
Ser
>WENV183399104
OLZQ01000426
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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