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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183412998
OMAN01000019
406043
Verrucomicrobiota
GCA
Cys
>WENV183413055
OMAN01000051
293125
Verrucomicrobiota
GAA
Phe
>WENV183413000
OMAN01000019
406350
Verrucomicrobiota
TGT
Thr
>WENV183412951
OMAN01000005
148006
Verrucomicrobiota
CAA
Leu
>WENV183412997
OMAN01000019
101600
Verrucomicrobiota
AAG
Leu
>WENV183413046
OMAN01000045
293105
Verrucomicrobiota
CAT
Met
>WENV183412975
OMAN01000012
405901
Verrucomicrobiota
GCC
Gly
>WENV183413043
OMAN01000045
405901
Verrucomicrobiota
GCC
Gly
>WENV183413058
OMAN01000051
483642
Verrucomicrobiota
CCC
Gly
>WENV183412955
OMAN01000006
229220
Verrucomicrobiota
CAT
Met
>WENV183413068
OMAN01000061
8960
Verrucomicrobiota
CGA
Ser
>WENV183412947
OMAN01000005
101463
Verrucomicrobiota
TAA
Leu
>WENV183413081
OMAN01000074
157427
Verrucomicrobiota
GTC
Asp
>WENV183413115
OMAN01000104
157427
Verrucomicrobiota
GTC
Asp
>WENV183413001
OMAN01000019
293079
Verrucomicrobiota
CGC
Ala
>WENV183412952
OMAN01000005
120352
Verrucomicrobiota
TAG
Leu
>WENV183412948
OMAN01000005
292636
Verrucomicrobiota
>WENV183413054
OMAN01000051
489412
Verrucomicrobiota
TCC
Gly
>WENV183412999
OMAN01000019
298263
Verrucomicrobiota
TTC
Glu
>WENV183413044
OMAN01000045
298263
Verrucomicrobiota
TTC
Glu
>WENV183413063
OMAN01000054
293069
Verrucomicrobiota
CTT
Lys
>WENV183412946
OMAN01000005
406336
Verrucomicrobiota
CCT
Arg
>WENV183413073
OMAN01000067
406369
Verrucomicrobiota
CCG
Arg
>WENV183413004
OMAN01000024
405940
Verrucomicrobiota
GGT
Thr
>WENV183413114
OMAN01000104
406044
Verrucomicrobiota
CTG
Gln
>WENV183413057
OMAN01000051
187556
Verrucomicrobiota
GGG
Pro
>WENV183413045
OMAN01000045
406037
Verrucomicrobiota
GTG
His
>WENV183412944
OMAN01000004
406360
Verrucomicrobiota
GAC
Val
>WENV183412937
OMAN01000002
187548
Verrucomicrobiota
TCT
Arg
>WENV183413062
OMAN01000054
406040
Verrucomicrobiota
CGT
Thr
>WENV183413042
OMAN01000045
57652
Verrucomicrobiota
TGA
Ser
>WENV183412974
OMAN01000012
406039
Verrucomicrobiota
CAC
Val
>WENV183412976
OMAN01000012
406368
Verrucomicrobiota
TTG
Gln
>WENV183413080
OMAN01000074
21159
Verrucomicrobiota
GGA
Ser
>WENV183412954
OMAN01000006
101461
Verrucomicrobiota
GTA
Tyr
>WENV183412936
OMAN01000002
293095
Verrucomicrobiota
TTT
Lys
>WENV183413064
OMAN01000054
187561
Verrucomicrobiota
CGG
Pro
>WENV183413041
OMAN01000045
406342
Verrucomicrobiota
CAT
Met
>WENV183412953
OMAN01000006
406351
Verrucomicrobiota
GTT
Asn
>WENV183412973
OMAN01000012
303305
Verrucomicrobiota
GGC
Ala
>WENV183412945
OMAN01000004
406346
Verrucomicrobiota
TAC
Val
>WENV183412949
OMAN01000005
8938
Verrucomicrobiota
GCT
Ser
>WENV183413056
OMAN01000051
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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