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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183425784
OMBL01000173
101461
Verrucomicrobiota
GTA
Tyr
>WENV183425783
OMBL01000173
406351
Verrucomicrobiota
GTT
Asn
>WENV183425796
OMBL01000219
405940
Verrucomicrobiota
GGT
Thr
>WENV183425803
OMBL01000243
101600
Verrucomicrobiota
AAG
Leu
>WENV183425850
OMBL01000379
157427
Verrucomicrobiota
GTC
Asp
>WENV183425857
OMBL01000399
229220
Verrucomicrobiota
CAT
Met
>WENV183425858
OMBL01000405
187548
Verrucomicrobiota
TCT
Arg
>WENV183425896
OMBL01000526
293095
Verrucomicrobiota
TTT
Lys
>WENV183425903
OMBL01000565
406369
Verrucomicrobiota
CCG
Arg
>WENV183425905
OMBL01000602
187561
Verrucomicrobiota
CGG
Pro
>WENV183425906
OMBL01000610
101463
Verrucomicrobiota
TAA
Leu
>WENV183425907
OMBL01000610
292636
Verrucomicrobiota
>WENV183425908
OMBL01000610
8938
Verrucomicrobiota
GCT
Ser
>WENV183425911
OMBL01000626
293125
Verrucomicrobiota
GAA
Phe
>WENV183425912
OMBL01000626
186928
Verrucomicrobiota
TGG
Pro
>WENV183425953
OMBL01000861
406043
Verrucomicrobiota
GCA
Cys
>WENV183425954
OMBL01000861
298263
Verrucomicrobiota
TTC
Glu
>WENV183425955
OMBL01000865
8960
Verrucomicrobiota
CGA
Ser
>WENV183425965
OMBL01000921
483642
Verrucomicrobiota
CCC
Gly
>WENV183425964
OMBL01000921
507474
Verrucomicrobiota
TCC
Gly
>WENV183425978
OMBL01001082
148006
Verrucomicrobiota
CAA
Leu
>WENV183425985
OMBL01001161
405901
Verrucomicrobiota
GCC
Gly
>WENV183425989
OMBL01001183
120352
Verrucomicrobiota
TAG
Leu
>WENV183425990
OMBL01001197
57652
Verrucomicrobiota
TGA
Ser
>WENV183426002
OMBL01001288
406350
Verrucomicrobiota
TGT
Thr
>WENV183426007
OMBL01001356
21159
Verrucomicrobiota
GGA
Ser
>WENV183426026
OMBL01001642
303305
Verrucomicrobiota
GGC
Ala
>WENV183426042
OMBL01001886
406368
Verrucomicrobiota
TTG
Gln
>WENV183426080
OMBL01002462
406336
Verrucomicrobiota
CCT
Arg
>WENV183426087
OMBL01002544
293079
Verrucomicrobiota
CGC
Ala
>WENV183426092
OMBL01002617
187556
Verrucomicrobiota
GGG
Pro
>WENV183426099
OMBL01002779
406346
Verrucomicrobiota
TAC
Val
>WENV183426103
OMBL01002831
406342
Verrucomicrobiota
CAT
Met
>WENV183426173
OMBL01004928
405901
Verrucomicrobiota
GCC
Gly
>WENV183426183
OMBL01005105
293105
Verrucomicrobiota
CAT
Met
>WENV183426215
OMBL01006308
406360
Verrucomicrobiota
GAC
Val
>WENV183426217
OMBL01006379
406044
Verrucomicrobiota
CTG
Gln
>WENV183426237
OMBL01006779
293069
Verrucomicrobiota
CTT
Lys
>WENV183426236
OMBL01006779
406040
Verrucomicrobiota
CGT
Thr
>WENV183426274
OMBL01008227
406039
Verrucomicrobiota
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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