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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183452106
OMDC01003403
204388
Verrucomicrobiota
CAT
Met
>WENV183452291
OMDC01010144
406350
Verrucomicrobiota
TGT
Thr
>WENV183452323
OMDC01012232
148006
Verrucomicrobiota
CAA
Leu
>WENV183452199
OMDC01005902
101600
Verrucomicrobiota
AAG
Leu
>WENV183452481
OMDC01031108
405901
Verrucomicrobiota
GCC
Gly
>WENV183452196
OMDC01005599
483642
Verrucomicrobiota
CCC
Gly
>WENV183452320
OMDC01012057
101463
Verrucomicrobiota
TAA
Leu
>WENV183452325
OMDC01012724
157427
Verrucomicrobiota
GTC
Asp
>WENV183452155
OMDC01004592
293079
Verrucomicrobiota
CGC
Ala
>WENV183452455
OMDC01028101
120352
Verrucomicrobiota
TAG
Leu
>WENV183452286
OMDC01009792
292636
Verrucomicrobiota
>WENV183452197
OMDC01005599
489412
Verrucomicrobiota
TCC
Gly
>WENV183452422
OMDC01024551
406336
Verrucomicrobiota
CCT
Arg
>WENV183452426
OMDC01025372
406044
Verrucomicrobiota
CTG
Gln
>WENV183452014
OMDC01001698
187556
Verrucomicrobiota
GGG
Pro
>WENV183452423
OMDC01024579
187548
Verrucomicrobiota
TCT
Arg
>WENV183452093
OMDC01002979
406040
Verrucomicrobiota
CGT
Thr
>WENV183452336
OMDC01013515
57652
Verrucomicrobiota
TGA
Ser
>WENV183452350
OMDC01015327
406039
Verrucomicrobiota
CAC
Val
>WENV183452337
OMDC01013548
406368
Verrucomicrobiota
TTG
Gln
>WENV183452259
OMDC01008626
101461
Verrucomicrobiota
GTA
Tyr
>WENV183452192
OMDC01005497
187561
Verrucomicrobiota
CGG
Pro
>WENV183452200
OMDC01005937
406342
Verrucomicrobiota
CAT
Met
>WENV183452395
OMDC01020592
406351
Verrucomicrobiota
GTT
Asn
>WENV183452475
OMDC01029782
303305
Verrucomicrobiota
GGC
Ala
>WENV183452427
OMDC01025554
406346
Verrucomicrobiota
TAC
Val
>WENV183452226
OMDC01006900
8938
Verrucomicrobiota
GCT
Ser
>WENV183452372
OMDC01017645
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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