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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183476956
OMFB01005037
406350
Verrucomicrobiota
TGT
Thr
>WENV183477024
OMFB01015079
483642
Verrucomicrobiota
CCC
Gly
>WENV183476960
OMFB01005624
157427
Verrucomicrobiota
GTC
Asp
>WENV183476945
OMFB01003701
120352
Verrucomicrobiota
TAG
Leu
>WENV183476975
OMFB01007033
406336
Verrucomicrobiota
CCT
Arg
>WENV183476991
OMFB01008474
187556
Verrucomicrobiota
GGG
Pro
>WENV183476989
OMFB01008098
57652
Verrucomicrobiota
TGA
Ser
>WENV183476998
OMFB01009402
406039
Verrucomicrobiota
CAC
Val
>WENV183476981
OMFB01007437
406368
Verrucomicrobiota
TTG
Gln
>WENV183476986
OMFB01007835
187561
Verrucomicrobiota
CGG
Pro
>WENV183477029
OMFB01018029
406342
Verrucomicrobiota
CAT
Met
>WENV183476941
OMFB01003365
406351
Verrucomicrobiota
GTT
Asn
>WENV183477021
OMFB01014109
8938
Verrucomicrobiota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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