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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183477108
OMFC01000066
204388
Verrucomicrobiota
CAT
Met
>WENV183477183
OMFC01000212
406043
Verrucomicrobiota
GCA
Cys
>WENV183477231
OMFC01000304
293125
Verrucomicrobiota
GAA
Phe
>WENV183477197
OMFC01000238
406350
Verrucomicrobiota
TGT
Thr
>WENV183477132
OMFC01000118
148006
Verrucomicrobiota
CAA
Leu
>WENV183477182
OMFC01000212
101600
Verrucomicrobiota
AAG
Leu
>WENV183477348
OMFC01000816
293105
Verrucomicrobiota
CAT
Met
>WENV183477284
OMFC01000497
405901
Verrucomicrobiota
GCC
Gly
>WENV183477311
OMFC01000610
405901
Verrucomicrobiota
GCC
Gly
>WENV183477172
OMFC01000183
483642
Verrucomicrobiota
CCC
Gly
>WENV183477180
OMFC01000208
8960
Verrucomicrobiota
CGA
Ser
>WENV183477199
OMFC01000244
101463
Verrucomicrobiota
TAA
Leu
>WENV183477351
OMFC01000839
157427
Verrucomicrobiota
GTC
Asp
>WENV183477130
OMFC01000114
293079
Verrucomicrobiota
CGC
Ala
>WENV183477126
OMFC01000103
120352
Verrucomicrobiota
TAG
Leu
>WENV183477200
OMFC01000244
292636
Verrucomicrobiota
>WENV183477171
OMFC01000183
489412
Verrucomicrobiota
TCC
Gly
>WENV183477184
OMFC01000212
298263
Verrucomicrobiota
TTC
Glu
>WENV183477346
OMFC01000816
298263
Verrucomicrobiota
TTC
Glu
>WENV183477224
OMFC01000293
293069
Verrucomicrobiota
CTT
Lys
>WENV183477125
OMFC01000103
406336
Verrucomicrobiota
CCT
Arg
>WENV183477098
OMFC01000044
406369
Verrucomicrobiota
CCG
Arg
>WENV183477285
OMFC01000501
405940
Verrucomicrobiota
GGT
Thr
>WENV183477194
OMFC01000225
406044
Verrucomicrobiota
CTG
Gln
>WENV183477334
OMFC01000727
187556
Verrucomicrobiota
GGG
Pro
>WENV183477347
OMFC01000816
406037
Verrucomicrobiota
GTG
His
>WENV183477102
OMFC01000058
406360
Verrucomicrobiota
GAC
Val
>WENV183477095
OMFC01000041
187548
Verrucomicrobiota
TCT
Arg
>WENV183477223
OMFC01000293
406040
Verrucomicrobiota
CGT
Thr
>WENV183477161
OMFC01000167
57652
Verrucomicrobiota
TGA
Ser
>WENV183477036
OMFC01000002
406039
Verrucomicrobiota
CAC
Val
>WENV183477178
OMFC01000200
75458
Verrucomicrobiota
CAG
Leu
>WENV183477034
OMFC01000002
406368
Verrucomicrobiota
TTG
Gln
>WENV183477079
OMFC01000016
21159
Verrucomicrobiota
GGA
Ser
>WENV183477179
OMFC01000207
101461
Verrucomicrobiota
GTA
Tyr
>WENV183477041
OMFC01000004
293095
Verrucomicrobiota
TTT
Lys
>WENV183477225
OMFC01000293
187561
Verrucomicrobiota
CGG
Pro
>WENV183477160
OMFC01000167
406342
Verrucomicrobiota
CAT
Met
>WENV183477109
OMFC01000075
406351
Verrucomicrobiota
GTT
Asn
>WENV183477035
OMFC01000002
303305
Verrucomicrobiota
GGC
Ala
>WENV183477103
OMFC01000058
406346
Verrucomicrobiota
TAC
Val
>WENV183477201
OMFC01000244
8938
Verrucomicrobiota
GCT
Ser
>WENV183477232
OMFC01000304
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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