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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183479570
OMFG01002713
293125
Verrucomicrobiota
GAA
Phe
>WENV183479560
OMFG01000925
406350
Verrucomicrobiota
TGT
Thr
>WENV183479574
OMFG01003250
148006
Verrucomicrobiota
CAA
Leu
>WENV183479573
OMFG01003231
405901
Verrucomicrobiota
GCC
Gly
>WENV183479584
OMFG01004136
483642
Verrucomicrobiota
CCC
Gly
>WENV183479583
OMFG01003944
8960
Verrucomicrobiota
CGA
Ser
>WENV183479563
OMFG01001010
157427
Verrucomicrobiota
GTC
Asp
>WENV183479567
OMFG01001364
120352
Verrucomicrobiota
TAG
Leu
>WENV183479562
OMFG01000996
298263
Verrucomicrobiota
TTC
Glu
>WENV183479595
OMFG01010363
293069
Verrucomicrobiota
CTT
Lys
>WENV183479576
OMFG01003405
187556
Verrucomicrobiota
GGG
Pro
>WENV183479594
OMFG01010363
406040
Verrucomicrobiota
CGT
Thr
>WENV183479564
OMFG01001030
57652
Verrucomicrobiota
TGA
Ser
>WENV183479569
OMFG01002555
406039
Verrucomicrobiota
CAC
Val
>WENV183479558
OMFG01000536
75458
Verrucomicrobiota
CAG
Leu
>WENV183479559
OMFG01000588
406368
Verrucomicrobiota
TTG
Gln
>WENV183479571
OMFG01002713
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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